6VQC
Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 1 (from focused refinement)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth L] | PF01990 | e6vqcL1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: AtpF-like (From Topology) | T: AtpF-like | F: PF01990 | ECOD (1.6) |
F [auth d] | PF01992 | e6vqcd2 | A: alpha bundles | X: V-type ATP synthase subunit C | H: V-type ATP synthase subunit C (From Topology) | T: V-type ATP synthase subunit C | F: PF01992 | ECOD (1.6) |
I [auth g] | PF00137 | e6vqcg2 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
J [auth h] | PF00137 | e6vqch2 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
K [auth i] | PF00137 | e6vqci1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
L [auth j] | PF00137 | e6vqcj2 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
M [auth k] | PF00137 | e6vqck1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
N [auth l] | PF00137 | e6vqcl1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
O [auth m] | PF00137 | e6vqcm2 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
P [auth n] | PF00137 | e6vqcn1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
Q [auth o] | PF00137 | e6vqco2 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth L] | 3.40.50.10580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | ATPase, V1 complex, subunit F | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth H] | PF01813 | ATP synthase subunit D (ATP-synt_D) | ATP synthase subunit D | - | Family |
R [auth p] | PF07850 | Renin receptor-like protein (Renin_r) | Renin receptor-like protein | - | Family |
B [auth L] | PF01990 | ATP synthase (F/14-kDa) subunit (ATP-synt_F) | ATP synthase (F/14-kDa) subunit | - | Family |
D [auth b] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | - | Family |
E [auth c] | PF20520 | V0 complex accessory subunit Ac45/VOA1 transmembrane domain (Ac45-VOA1_TM) | V0 complex accessory subunit Ac45/VOA1 transmembrane domain | This entry represents the transmembrane domain from ER/Golgi membrane proteins including V0 complex accessory subunit Ac45 (ATP6AP1, also known as V-type proton ATPase subunit S1) from animals and the yeast homologue V0 assembly protein 1 (VOA1) whic ... | Domain |
F [auth d] | PF01992 | ATP synthase (C/AC39) subunit (vATP-synt_AC39) | ATP synthase (C/AC39) subunit | - | Family |
G [auth e] | PF05493 | ATP synthase subunit H (ATP_synt_H) | ATP synthase subunit H | - | Family |
PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |