Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8103769 3000850 SCOP2B (2022-06-29)
L [auth a]SCOP2 FamilyPhotosystem I subunits PsaA/PsaB8103768 4002118 SCOP2 (2022-06-29)
L [auth a]SCOP2 SuperfamilyPhotosystem I subunits PsaA/PsaB8103769 3000850 SCOP2 (2022-06-29)
W [auth 1]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8103769 3000850 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins8103775 3000020 SCOP2B (2022-06-29)
N [auth c]SCOP2B Superfamily4Fe-4S ferredoxins8103775 3000020 SCOP2B (2022-06-29)
Y [auth 3]SCOP2 Family7-Fe ferredoxin8103774 4001227 SCOP2 (2022-06-29)
Y [auth 3]SCOP2 Superfamily4Fe-4S ferredoxins8103775 3000020 SCOP2 (2022-06-29)
DSCOP2 FamilyPhotosystem I subunit PsaD8103772 4003498 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyPhotosystem I subunit PsaD8103773 3000951 SCOP2 (2022-06-29)
O [auth d]SCOP2B SuperfamilyPhotosystem I subunit PsaD8103773 3000951 SCOP2B (2022-06-29)
Z [auth 4]SCOP2B SuperfamilyPhotosystem I subunit PsaD8103773 3000951 SCOP2B (2022-06-29)
CA [auth 7]SCOP2 FamilySubunit VIII of photosystem I reaction centre PsaI8103940 4002098 SCOP2 (2022-06-29)
CA [auth 7]SCOP2 SuperfamilySubunit VIII of photosystem I reaction centre PsaI8103941 3000819 SCOP2 (2022-06-29)
G [auth I]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre PsaI8103941 3000819 SCOP2B (2022-06-29)
R [auth i]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre PsaI8103941 3000819 SCOP2B (2022-06-29)
DA [auth 8]SCOP2 FamilySubunit IX of photosystem I reaction centre PsaJ8103780 4002101 SCOP2 (2022-06-29)
DA [auth 8]SCOP2 SuperfamilySubunit IX of photosystem I reaction centre PsaJ8103781 3000824 SCOP2 (2022-06-29)
H [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre PsaJ8103781 3000824 SCOP2B (2022-06-29)
S [auth j]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre PsaJ8103781 3000824 SCOP2B (2022-06-29)
FA [auth 0]SCOP2B SuperfamilyPhotosystem I reaction center subunit XI PsaL8103767 3000870 SCOP2B (2022-06-29)
J [auth L]SCOP2 FamilyPhotosystem I reaction center subunit XI PsaL8103766 4002135 SCOP2 (2022-06-29)
J [auth L]SCOP2 SuperfamilyPhotosystem I reaction center subunit XI PsaL8103767 3000870 SCOP2 (2022-06-29)
U [auth l]SCOP2B SuperfamilyPhotosystem I reaction center subunit XI PsaL8103767 3000870 SCOP2B (2022-06-29)
GA [auth z]SCOP2B SuperfamilySubunit XII of photosystem I reaction centre PsaM8103771 3000829 SCOP2B (2022-06-29)
K [auth M]SCOP2B SuperfamilySubunit XII of photosystem I reaction centre PsaM8103771 3000829 SCOP2B (2022-06-29)
V [auth m]SCOP2 FamilySubunit XII of photosystem I reaction centre PsaM8103770 4002104 SCOP2 (2022-06-29)
V [auth m]SCOP2 SuperfamilySubunit XII of photosystem I reaction centre PsaM8103771 3000829 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8103939 3000850 SCOP2B (2022-06-29)
M [auth b]SCOP2 FamilyPhotosystem I subunits PsaA/PsaB8103938 4002118 SCOP2 (2022-06-29)
M [auth b]SCOP2 SuperfamilyPhotosystem I subunits PsaA/PsaB8103939 3000850 SCOP2 (2022-06-29)
X [auth 2]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8103939 3000850 SCOP2B (2022-06-29)
AA [auth 5]SCOP2B SuperfamilyElectron transport accessory proteins8103777 3000325 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins8103777 3000325 SCOP2B (2022-06-29)
P [auth e]SCOP2 FamilyPhotosystem I accessory protein E (PsaE)8103776 4001749 SCOP2 (2022-06-29)
P [auth e]SCOP2 SuperfamilyElectron transport accessory proteins8103777 3000325 SCOP2 (2022-06-29)
BA [auth 6]SCOP2B SuperfamilySubunit III of photosystem I reaction centre PsaF8103779 3000813 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre PsaF8103779 3000813 SCOP2B (2022-06-29)
Q [auth f]SCOP2 FamilySubunit III of photosystem I reaction centre PsaF8103778 4002091 SCOP2 (2022-06-29)
Q [auth f]SCOP2 SuperfamilySubunit III of photosystem I reaction centre PsaF8103779 3000813 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00223e6vpvA2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
APF00223e6vpvA1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
L [auth a]PF00223e6vpva2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
L [auth a]PF00223e6vpva1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
W [auth 1]PF00223e6vpv12 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
W [auth 1]PF00223e6vpv11 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
CPF00037e6vpvC1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
N [auth c]PF00037e6vpvc1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
Y [auth 3]PF00037e6vpv31 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
DPF02531e6vpvD1 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PF02531ECOD (1.6)
O [auth d]PF02531e6vpvd1 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PF02531ECOD (1.6)
Z [auth 4]PF02531e6vpv41 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PF02531ECOD (1.6)
CA [auth 7]PF00796e6vpv71 A: extended segmentsX: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)T: Subunit VIII of photosystem I reaction centre, PsaIF: PF00796ECOD (1.6)
G [auth I]PF00796e6vpvI1 A: extended segmentsX: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)T: Subunit VIII of photosystem I reaction centre, PsaIF: PF00796ECOD (1.6)
R [auth i]PF00796e6vpvi1 A: extended segmentsX: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)T: Subunit VIII of photosystem I reaction centre, PsaIF: PF00796ECOD (1.6)
DA [auth 8]PF01701e6vpv81 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PF01701ECOD (1.6)
H [auth J]PF01701e6vpvJ1 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PF01701ECOD (1.6)
S [auth j]PF01701e6vpvj1 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PF01701ECOD (1.6)
FA [auth 0]PF02605e6vpv01 A: alpha bundlesX: Photosystem I reaction center subunit XI, PsaL (From Topology)H: Photosystem I reaction center subunit XI, PsaL (From Topology)T: Photosystem I reaction center subunit XI, PsaLF: PF02605ECOD (1.6)
J [auth L]PF02605e6vpvL1 A: alpha bundlesX: Photosystem I reaction center subunit XI, PsaL (From Topology)H: Photosystem I reaction center subunit XI, PsaL (From Topology)T: Photosystem I reaction center subunit XI, PsaLF: PF02605ECOD (1.6)
U [auth l]PF02605e6vpvl1 A: alpha bundlesX: Photosystem I reaction center subunit XI, PsaL (From Topology)H: Photosystem I reaction center subunit XI, PsaL (From Topology)T: Photosystem I reaction center subunit XI, PsaLF: PF02605ECOD (1.6)
GA [auth z]PF07465e6vpvz1 A: extended segmentsX: Subunit XII of photosystem I reaction centre, PsaM (From Topology)H: Subunit XII of photosystem I reaction centre, PsaM (From Topology)T: Subunit XII of photosystem I reaction centre, PsaMF: PF07465ECOD (1.6)
K [auth M]PF07465e6vpvM1 A: extended segmentsX: Subunit XII of photosystem I reaction centre, PsaM (From Topology)H: Subunit XII of photosystem I reaction centre, PsaM (From Topology)T: Subunit XII of photosystem I reaction centre, PsaMF: PF07465ECOD (1.6)
V [auth m]PF07465e6vpvm1 A: extended segmentsX: Subunit XII of photosystem I reaction centre, PsaM (From Topology)H: Subunit XII of photosystem I reaction centre, PsaM (From Topology)T: Subunit XII of photosystem I reaction centre, PsaMF: PF07465ECOD (1.6)
BPF00223e6vpvB2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
BPF00223e6vpvB1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
M [auth b]PF00223e6vpvb2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
M [auth b]PF00223e6vpvb1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
X [auth 2]PF00223e6vpv22 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
X [auth 2]PF00223e6vpv21 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
AA [auth 5]PF02427e6vpv51 A: beta barrelsX: SH3H: SH3T: SH3F: PF02427ECOD (1.6)
EPF02427e6vpvE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF02427ECOD (1.6)
P [auth e]PF02427e6vpve1 A: beta barrelsX: SH3H: SH3T: SH3F: PF02427ECOD (1.6)
BA [auth 6]PF02507e6vpv61 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PF02507ECOD (1.6)
FPF02507e6vpvF1 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PF02507ECOD (1.6)
Q [auth f]PF02507e6vpvf1 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PF02507ECOD (1.6)
EA [auth 9]PF01241e6vpv91 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PF01241ECOD (1.6)
I [auth K]PF01241e6vpvK1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PF01241ECOD (1.6)
T [auth k]PF01241e6vpvk1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PF01241ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
L [auth a],
W [auth 1]
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
C,
N [auth c],
Y [auth 3]
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
D,
O [auth d],
Z [auth 4]
PF02531PsaD (PsaD)PsaD- Family
CA [auth 7],
G [auth I],
R [auth i]
PF00796Photosystem I reaction centre subunit VIII (PSI_8)Photosystem I reaction centre subunit VIII- Family
DA [auth 8],
H [auth J],
S [auth j]
PF01701Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)Photosystem I reaction centre subunit IX / PsaJ- Family
FA [auth 0],
J [auth L],
U [auth l]
PF02605Photosystem I reaction centre subunit XI (PsaL)Photosystem I reaction centre subunit XI- Family
GA [auth z],
K [auth M],
V [auth m]
PF07465Photosystem I protein M (PsaM) (PsaM)Photosystem I protein M (PsaM)- Family
B,
M [auth b],
X [auth 2]
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
AA [auth 5],
E,
P [auth e]
PF02427Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE)Photosystem I reaction centre subunit IV / PsaEPsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1].Domain
BA [auth 6],
F,
Q [auth f]
PF02507Photosystem I reaction centre subunit III (PSI_PsaF)Photosystem I reaction centre subunit III- Family
EA [auth 9],
I [auth K],
T [auth k]
PF01241Photosystem I psaG / psaK (PSI_PSAK)Photosystem I psaG / psaK- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
L [auth a],
W [auth 1]
Photosystem I P700 chlorophyll a apoprotein A1
C,
N [auth c],
Y [auth 3]
Photosystem I iron-sulfur center
D,
O [auth d],
Z [auth 4]
Photosystem I reaction center subunit II-
CA [auth 7],
G [auth I],
R [auth i]
Photosystem I reaction center subunit VIII-
DA [auth 8],
H [auth J],
S [auth j]
Photosystem I reaction center subunit IX-
FA [auth 0],
J [auth L],
U [auth l]
Photosystem I reaction center subunit XI-
GA [auth z],
K [auth M],
V [auth m]
Photosystem I reaction center subunit XII-
B,
M [auth b],
X [auth 2]
Photosystem I P700 chlorophyll a apoprotein A2
AA [auth 5],
E,
P [auth e]
Photosystem I reaction center subunit IV-
BA [auth 6],
F,
Q [auth f]
PSI-F-
EA [auth 9],
I [auth K],
T [auth k]
Photosystem I reaction center subunit PsaK-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
L [auth a],
W [auth 1]
IPR006243Photosystem I PsaAFamily
A,
L [auth a],
W [auth 1]
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
A,
L [auth a],
W [auth 1]
IPR001280Photosystem I PsaA/PsaBFamily
A,
L [auth a],
W [auth 1]
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
C,
N [auth c],
Y [auth 3]
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
C,
N [auth c],
Y [auth 3]
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
C,
N [auth c],
Y [auth 3]
IPR017491Photosystem I protein PsaCFamily
D,
O [auth d],
Z [auth 4]
IPR003685Photosystem I PsaDFamily
D,
O [auth d],
Z [auth 4]
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
CA [auth 7],
G [auth I],
R [auth i]
IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
CA [auth 7],
G [auth I],
R [auth i]
IPR001302Photosystem I reaction centre subunit VIIIFamily
DA [auth 8],
H [auth J],
S [auth j]
IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
DA [auth 8],
H [auth J],
S [auth j]
IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
FA [auth 0],
J [auth L],
U [auth l]
IPR003757Photosystem I PsaL, reaction centre subunit XIDomain
FA [auth 0],
J [auth L],
U [auth l]
IPR022980Photosystem I, reaction centre subunit XIFamily
FA [auth 0],
J [auth L],
U [auth l]
IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
GA [auth z],
K [auth M],
V [auth m]
IPR010010Photosystem I PsaM, reaction centreFamily
GA [auth z],
K [auth M],
V [auth m]
IPR037279Photosystem I PsaM, reaction centre superfamilyHomologous Superfamily
B,
M [auth b],
X [auth 2]
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
B,
M [auth b],
X [auth 2]
IPR001280Photosystem I PsaA/PsaBFamily
B,
M [auth b],
X [auth 2]
IPR006244Photosystem I PsaBFamily
B,
M [auth b],
X [auth 2]
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
AA [auth 5],
E,
P [auth e]
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
AA [auth 5],
E,
P [auth e]
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
BA [auth 6],
F,
Q [auth f]
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
BA [auth 6],
F,
Q [auth f]
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
EA [auth 9],
I [auth K],
T [auth k]
IPR037101Photosystem I reaction centre subunit PsaKHomologous Superfamily
EA [auth 9],
I [auth K],
T [auth k]
IPR000549Photosystem I reaction center subunit V/PsaKFamily
EA [auth 9],
I [auth K],
T [auth k]
IPR035982Photosystem I reaction centre subunit PsaK superfamilyHomologous Superfamily
EA [auth 9],
I [auth K],
T [auth k]
IPR017492Photosystem I reaction center subunit PsaKFamily