6VPS | pdb_00006vps

Cryo-EM structure of the amyloid core of Drosophila Orb2 isolated from head

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I	Translational regulator orb2	mRNA 3'-UTR binding RNA binding binding nucleic acid binding mRNA binding translation regulator activity mRNA regulatory element binding translation repressor activity translation repressor activity translation factor activity translation factor activity, RNA binding translation activator activity ribonucleoprotein complex binding protein-containing complex binding ribosome binding mRNA 3'-UTR binding RNA binding binding nucleic acid binding mRNA binding translation regulator activity mRNA regulatory element binding translation repressor activity translation repressor activity translation factor activity translation factor activity, RNA binding translation activator activity ribonucleoprotein complex binding protein-containing complex binding ribosome binding identical protein binding protein binding	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process translation gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of cytoplasmic translation negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process cytoplasmic translation metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of cytoplasmic translation regulation of metabolic process developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation regulation of protein stability regulation of biological quality protein stabilization spermatid development multicellular organismal process spermatid differentiation cellular developmental process cellularization cell development cellular process involved in reproduction in multicellular organism multicellular organism development cell differentiation anatomical structure development sperm individualization anatomical structure morphogenesis anatomical structure formation involved in morphogenesis germ cell development cell division asymmetric cell division behavior system process learning or memory long-term memory nervous system process cognition memory positive regulation of protein metabolic process positive regulation of biological process positive regulation of translation positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of gene expression motile cilium assembly cell projection organization sperm flagellum assembly microtubule cytoskeleton organization plasma membrane bounded cell projection assembly cilium or flagellum-dependent cell motility cellular component biogenesis cellular component organization microtubule bundle formation cellular component assembly cilium-dependent cell motility cilium assembly cellular component organization or biogenesis cell motility sperm axoneme assembly cilium organization sperm motility organelle assembly plasma membrane bounded cell projection organization cilium movement involved in cell motility organelle organization flagellated sperm motility microtubule-based movement microtubule-based process cilium movement axoneme assembly cell projection assembly cytoskeleton organization male meiosis I organelle fission meiotic cell cycle male meiotic nuclear division meiotic cell cycle process nuclear division meiosis I meiosis I cell cycle process meiotic nuclear division cell cycle cell cycle process male mating behavior male courtship behavior reproductive behavior courtship behavior mating behavior	somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body dendrite terminus cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection cell periphery cell cortex intracellular anatomical structure somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body dendrite terminus cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection cell periphery cell cortex intracellular anatomical structure cytoplasm membrane plasma membrane synapse cell junction plasma membrane region synaptic membrane cytosol presynapse protein-containing complex perinuclear region of cytoplasm axon axon terminus distal axon neuron projection terminus postsynapse membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR038446	CEBP, ZZ domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR000504	RNA recognition motif domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR032296	Cytoplasmic polyadenylation element-binding protein, ZZ domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR034819	Cytoplasmic polyadenylation element-binding protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR035979	RNA-binding domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.