6V3D | pdb_00006v3d

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I [auth E]	SCOP2B Superfamily	Ribosomal protein L4	8094701	3001146	SCOP2B (2022-06-29)
H [auth D]	SCOP2B Superfamily	Translational proteins	8094765	3000811	SCOP2B (2022-06-29)
DA [auth Z]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8094090	3001320	SCOP2B (2022-06-29)
C [auth 2]	SCOP2 Family	Ribosomal protein L35p	8095140	4003406	SCOP2 (2022-06-29)
C [auth 2]	SCOP2 Superfamily	L35p-like	8095141	3000790	SCOP2 (2022-06-29)
BA [auth X]	SCOP2B Superfamily	Ribosomal protein L29 (L29p)	8095223	3000713	SCOP2B (2022-06-29)
AA [auth W]	SCOP2B Superfamily	L28p-like	8094655	3001966	SCOP2B (2022-06-29)
Z [auth V]	SCOP2B Superfamily	Ribosomal L27 protein-like	8094697	3000539	SCOP2B (2022-06-29)
Y [auth U]	SCOP2B Superfamily	Ribosomal protein L25-like	8095559	3001161	SCOP2B (2022-06-29)
X [auth T]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8095143	3000334	SCOP2B (2022-06-29)
W [auth S]	SCOP2 Family	L23p	8095100	4000943	SCOP2 (2022-06-29)
W [auth S]	SCOP2 Superfamily	Ribosomal proteins S24e, L23 and L15e	8095101	3000210	SCOP2 (2022-06-29)
V [auth R]	SCOP2 Family	Ribosomal protein L22	8094616	4001212	SCOP2 (2022-06-29)
V [auth R]	SCOP2 Superfamily	Ribosomal protein L22	8094617	3001078	SCOP2 (2022-06-29)
U [auth Q]	SCOP2B Superfamily	l21p-like	8094927	3002005	SCOP2B (2022-06-29)
T [auth P]	SCOP2B Superfamily	Ribosomal protein L20	8094513	3000563	SCOP2B (2022-06-29)
S [auth O]	SCOP2 Family	Ribosomal protein L19	8094728	4001761	SCOP2 (2022-06-29)
S [auth O]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8094729	3000334	SCOP2 (2022-06-29)
R [auth N]	SCOP2 Family	Ribosomal protein L18p and S11	8095060	4000555	SCOP2 (2022-06-29)
R [auth N]	SCOP2 Superfamily	Translational machinery components	8095061	3000571	SCOP2 (2022-06-29)
Q [auth M]	SCOP2B Superfamily	Prokaryotic ribosomal protein L17	8094635	3000995	SCOP2B (2022-06-29)
P [auth L]	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8094629	3000884	SCOP2B (2022-06-29)
O [auth K]	SCOP2 Family	Ribosomal proteins L15p and L18e	8094806	4003555	SCOP2 (2022-06-29)
O [auth K]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8094807	3001045	SCOP2 (2022-06-29)
M [auth I]	SCOP2B Superfamily	Ribosomal protein L13	8094699	3001134	SCOP2B (2022-06-29)
L [auth H]	SCOP2B Superfamily	L9 N-domain-like	8094703	3000338	SCOP2B (2022-06-29)
J [auth F]	SCOP2 Family	Ribosomal protein L5	8094033	4001498	SCOP2 (2022-06-29)
J [auth F]	SCOP2 Superfamily	RL5-like	8094034	3001709	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth E]	Ribosomal_L4	e6v3dE1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
H [auth D]	Ribosomal_L3	e6v3dD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
G [auth C]	Ribosomal_L2_1	e6v3dC2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
G [auth C]	Ribosomal_L2_C	e6v3dC1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C	ECOD (1.6)
D [auth 3]	Ribosomal_L36	e6v3d31	A: few secondary structure elements	X: Ribosomal protein L36 (From Topology)	H: Ribosomal protein L36 (From Topology)	T: Ribosomal protein L36	F: Ribosomal_L36	ECOD (1.6)
DA [auth Z]	Ribosomal_L32p	e6v3dZ1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L32p	ECOD (1.6)
C [auth 2]	Ribosomal_L35p	e6v3d21	A: a+b two layers	X: Ribosomal protein L35p (From Topology)	H: Ribosomal protein L35p (From Topology)	T: Ribosomal protein L35p	F: Ribosomal_L35p	ECOD (1.6)
CA [auth Y]	Ribosomal_L30	e6v3dY1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30	ECOD (1.6)
BA [auth X]	Ribosomal_L29	e6v3dX1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29	ECOD (1.6)
AA [auth W]	Ribosomal_L28	e6v3dW1	A: few secondary structure elements	X: Ribosomal protein bL28-related (From Homology)	H: Ribosomal protein bL28-related	T: Ribosomal protein L28	F: Ribosomal_L28	ECOD (1.6)
Z [auth V]	Ribosomal_L27	e6v3dV1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal L27 protein	F: Ribosomal_L27	ECOD (1.6)
Y [auth U]	Ribosomal_L25p	e6v3dU1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_L25p	ECOD (1.6)
X [auth T]	ribosomal_L24_1	e6v3dT1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: ribosomal_L24_1	ECOD (1.6)
W [auth S]	Ribosomal_L23_2	e6v3dS1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_2	ECOD (1.6)
V [auth R]	Ribosomal_L22	e6v3dR1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
U [auth Q]	Ribosomal_L21p	e6v3dQ1	A: beta barrels	X: Ribosomal protein L21p (From Topology)	H: Ribosomal protein L21p (From Topology)	T: Ribosomal protein L21p	F: Ribosomal_L21p	ECOD (1.6)
T [auth P]	Ribosomal_L20	e6v3dP1	A: alpha arrays	X: PABP domain-like	H: Ribosomal protein L20 (From Topology)	T: Ribosomal protein L20	F: Ribosomal_L20	ECOD (1.6)
B [auth 1]	Ribosomal_L34	e6v3d11	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
S [auth O]	Ribosomal_L19	e6v3dO1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L19	ECOD (1.6)
R [auth N]	Ribosomal_L18p	e6v3dN1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L18p	ECOD (1.6)
Q [auth M]	Ribosomal_L17_1	e6v3dM1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Prokaryotic ribosomal protein L17 (From Topology)	T: Prokaryotic ribosomal protein L17	F: Ribosomal_L17_1	ECOD (1.6)
P [auth L]	Ribosomal_L16	e6v3dL1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
O [auth K]	Ribosomal_L27A	e6v3dK1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
N [auth J]	Ribosomal_L14	e6v3dJ1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
M [auth I]	Ribosomal_L13	e6v3dI1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
L [auth H]	Ribosomal_L9_N	e6v3dH1	A: a+b two layers	X: L9 N-domain-like	H: L9 N-domain-like (From Topology)	T: L9 N-domain-like	F: Ribosomal_L9_N	ECOD (1.6)
K [auth G]	Ribosomal_L6	e6v3dG1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
K [auth G]	Ribosomal_L6_1	e6v3dG2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_1	ECOD (1.6)
J [auth F]	Ribosomal_L5_C	e6v3dF1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
A [auth 0]	Ribosomal_L33	e6v3d01	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L33	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
H [auth D]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
G [auth C]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
G [auth C]	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain
DA [auth Z]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
C [auth 2]	PF01632	Ribosomal protein L35 (Ribosomal_L35p)	Ribosomal protein L35	-	Family
BA [auth X]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
AA [auth W]	PF00830	Ribosomal L28 family (Ribosomal_L28)	Ribosomal L28 family	-	Family
Y [auth U]	PF01386	Ribosomal L25p family (Ribosomal_L25p)	Ribosomal L25p family	Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.	Domain
X [auth T]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
X [auth T]	PF00467	KOW motif (KOW)	KOW motif	-	Family
W [auth S]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
U [auth Q]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
T [auth P]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
B [auth 1]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
S [auth O]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
Q [auth M]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
P [auth L]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
O [auth K]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
N [auth J]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
M [auth I]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
L [auth H]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
K [auth G]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
J [auth F]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
J [auth F]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth E]	50S ribosomal protein L4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
H [auth D]	50S ribosomal protein L3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
G [auth C]	50S ribosomal protein L2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
F [auth B]	5s ribosomal RNA	-	-	-
E [auth AN1]	23s ribosomal RNA	-	-	-
D [auth 3]	50S ribosomal protein L36	-	-	-
DA [auth Z]	50S ribosomal protein L32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
C [auth 2]	50S ribosomal protein L35	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
CA [auth Y]	50S ribosomal protein L30	-	-	-
BA [auth X]	50S ribosomal protein L29	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
AA [auth W]	50S ribosomal protein L28	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Z [auth V]	50S ribosomal protein L27	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Y [auth U]	50S ribosomal protein L25	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
X [auth T]	50S ribosomal protein L24	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
W [auth S]	50S ribosomal protein L23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
V [auth R]	50S ribosomal protein L22	-	-	-
U [auth Q]	50S ribosomal protein L21	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
T [auth P]	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
B [auth 1]	50S ribosomal protein L34	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
S [auth O]	50S ribosomal protein L19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth N]	50S ribosomal protein L18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth M]	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth L]	50S ribosomal protein L16	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth K]	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth J]	50S ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M [auth I]	50S ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth H]	50S ribosomal protein L9	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
K [auth G]	50S ribosomal protein L6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth F]	50S ribosomal protein L5	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
A [auth 0]	50S ribosomal protein L33	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth E]	IPR013005	Large ribosomal subunit protein uL4-like	Family
I [auth E]	IPR002136	Large ribosomal subunit protein uL4	Family
I [auth E]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
H [auth D]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
H [auth D]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
H [auth D]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
H [auth D]	IPR000597	Large ribosomal subunit protein uL3	Family
G [auth C]	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
G [auth C]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
G [auth C]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
G [auth C]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
G [auth C]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
G [auth C]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
G [auth C]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
G [auth C]	IPR002171	Large ribosomal subunit protein uL2	Family
DA [auth Z]	IPR002677	Large ribosomal subunit protein bL32	Family
DA [auth Z]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
DA [auth Z]	IPR044957	Large ribosomal subunit protein bL32, bacteria	Family
C [auth 2]	IPR021137	Large ribosomal subunit protein bL35-like	Family
C [auth 2]	IPR018265	Large ribosomal subunit protein bL35, conserved site	Conserved Site
C [auth 2]	IPR001706	Large ribosomal subunit protein bL35	Family
C [auth 2]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
BA [auth X]	IPR050063	Universal ribosomal protein uL29	Family
BA [auth X]	IPR001854	Large ribosomal subunit protein uL29	Family
BA [auth X]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
AA [auth W]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
AA [auth W]	IPR001383	Large ribosomal subunit protein bL28, bacteria	Family
AA [auth W]	IPR026569	Large ribosomal subunit protein bL28	Family
AA [auth W]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
Z [auth V]	IPR001684	Large ribosomal subunit protein bL27	Family
Z [auth V]	IPR018261	Large ribosomal subunit protein bL27, conserved site	Conserved Site
Y [auth U]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
Y [auth U]	IPR020055	Ribosomal protein bL25, short-form	Family
Y [auth U]	IPR029751	Large ribosomal subunit protein bL25, L25 domain	Domain
Y [auth U]	IPR020056	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal	Homologous Superfamily
Y [auth U]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
X [auth T]	IPR003256	Large ribosomal subunit protein uL24	Family
X [auth T]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
X [auth T]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
X [auth T]	IPR005824	KOW	Domain
X [auth T]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
X [auth T]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
W [auth S]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
W [auth S]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
W [auth S]	IPR013025	Large ribosomal subunit protein uL23-like	Family
U [auth Q]	IPR028909	Large ribosomal subunit protein bL21-like	Family
U [auth Q]	IPR001787	Large ribosomal subunit protein bL21	Family
U [auth Q]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
U [auth Q]	IPR018258	Large ribosomal subunit protein bL21, conserved site	Conserved Site
T [auth P]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
T [auth P]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
T [auth P]	IPR005813	Large ribosomal subunit protein bL20	Family
B [auth 1]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
B [auth 1]	IPR000271	Large ribosomal subunit protein bL34	Family
S [auth O]	IPR001857	Large ribosomal subunit protein bL19	Family
S [auth O]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
S [auth O]	IPR018257	Large ribosomal subunit protein bL19, conserved site	Conserved Site
S [auth O]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
R [auth N]	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
R [auth N]	IPR004389	Large ribosomal subunit protein uL18, bacteria	Family
Q [auth M]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
Q [auth M]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
Q [auth M]	IPR000456	Large ribosomal subunit protein bL17	Family
P [auth L]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
P [auth L]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
P [auth L]	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
P [auth L]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
P [auth L]	IPR047873	Large ribosomal subunit protein uL16	Family
O [auth K]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
O [auth K]	IPR030878	Large ribosomal subunit protein uL15	Family
O [auth K]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
O [auth K]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
O [auth K]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
N [auth J]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
N [auth J]	IPR000218	Large ribosomal subunit protein uL14	Family
N [auth J]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
N [auth J]	IPR005745	Large ribosomal subunit protein uL14, bacteria	Family
M [auth I]	IPR005822	Large ribosomal subunit protein uL13	Family
M [auth I]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
M [auth I]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
L [auth H]	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
L [auth H]	IPR020594	Large ribosomal subunit protein bL9, bacteria/chloroplast	Family
L [auth H]	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
L [auth H]	IPR036791	Large ribosomal subunit protein bL9, C-terminal domain superfamily	Homologous Superfamily
L [auth H]	IPR020069	Large ribosomal subunit protein bL9, C-terminal	Domain
L [auth H]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
L [auth H]	IPR000244	Large ribosomal subunit protein bL9	Family
K [auth G]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
K [auth G]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
K [auth G]	IPR000702	Large ribosomal subunit protein uL6-like	Family
K [auth G]	IPR019906	Large ribosomal subunit protein uL6, bacteria	Family
K [auth G]	IPR002358	Large ribosomal subunit protein uL6, conserved site	Conserved Site
J [auth F]	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
J [auth F]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
J [auth F]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
J [auth F]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
J [auth F]	IPR002132	Large ribosomal subunit protein uL5	Family
J [auth F]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family