6V10 | pdb_00006v10

genome-containing AAV8 particles


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZA [auth z]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
YA [auth y]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
XA [auth x]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
WA [auth w]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
USCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
HB [auth 8]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
GB [auth 7]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
FB [auth 6]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
EB [auth 5]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
DB [auth 4]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
CB [auth 3]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
BB [auth 2]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
AB [auth 1]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyssDNA viruses 8071440 3000931 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZA [auth z]Parvo_coate6v10z1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
ZParvo_coate6v10Z1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
YA [auth y]Parvo_coate6v10y1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
YParvo_coate6v10Y1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
XA [auth x]Parvo_coate6v10x1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
XParvo_coate6v10X1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
WA [auth w]Parvo_coate6v10w1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
WParvo_coate6v10W1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
VA [auth v]Parvo_coate6v10v1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
VParvo_coate6v10V1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
UA [auth u]Parvo_coate6v10u1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
UParvo_coate6v10U1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
TA [auth t]Parvo_coate6v10t1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
TParvo_coate6v10T1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
SA [auth s]Parvo_coate6v10s1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
SParvo_coate6v10S1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
RA [auth r]Parvo_coate6v10r1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
RParvo_coate6v10R1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
QA [auth q]Parvo_coate6v10q1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
QParvo_coate6v10Q1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
PA [auth p]Parvo_coate6v10p1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
PParvo_coate6v10P1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
OA [auth o]Parvo_coate6v10o1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
OParvo_coate6v10O1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
NA [auth n]Parvo_coate6v10n1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
NParvo_coate6v10N1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
MA [auth m]Parvo_coate6v10m1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
MParvo_coate6v10M1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
LA [auth l]Parvo_coate6v10l1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
LParvo_coate6v10L1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
KA [auth k]Parvo_coate6v10k1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
KParvo_coate6v10K1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
JA [auth j]Parvo_coate6v10j1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
JParvo_coate6v10J1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
IA [auth i]Parvo_coate6v10i1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
IParvo_coate6v10I1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
HB [auth 8]Parvo_coate6v1081 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
HA [auth h]Parvo_coate6v10h1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
HParvo_coate6v10H1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
GB [auth 7]Parvo_coate6v1071 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
GA [auth g]Parvo_coate6v10g1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
GParvo_coate6v10G1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
FB [auth 6]Parvo_coate6v1061 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
FA [auth f]Parvo_coate6v10f1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
FParvo_coate6v10F1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
EB [auth 5]Parvo_coate6v1051 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
EA [auth e]Parvo_coate6v10e1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
EParvo_coate6v10E1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
DB [auth 4]Parvo_coate6v1041 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
DA [auth d]Parvo_coate6v10d1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
DParvo_coate6v10D1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
CB [auth 3]Parvo_coate6v1031 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
CA [auth c]Parvo_coate6v10c1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
CParvo_coate6v10C1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
BB [auth 2]Parvo_coate6v1021 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
BA [auth b]Parvo_coate6v10b1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
BParvo_coate6v10B1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
AB [auth 1]Parvo_coate6v1011 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
AA [auth a]Parvo_coate6v10a1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
AParvo_coate6v10A1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*CP*A)-3')---
Capsid protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013607Phospholipase A2-like domainDomain
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
IPR001403Coat protein VP1/VP2, ParvovirusDomain
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily