6UNZ | pdb_00006unz

Crystal structure of cytosolic fumarate hydratase from Leishmania major

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Fumerase	e6unzH3	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
H	Fumerase_C	e6unzH2	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)
G	Fumerase	e6unzG2	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
G	Fumerase_C	e6unzG3	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)
F	Fumerase	e6unzF1	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
F	Fumerase_C	e6unzF3	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)
E	Fumerase	e6unzE1	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
E	Fumerase_C	e6unzE3	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)
D	Fumerase	e6unzD3	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
D	Fumerase_C	e6unzD2	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)
C	Fumerase	e6unzC1	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
C	Fumerase_C	e6unzC3	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)
B	Fumerase	e6unzB1	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
B	Fumerase_C	e6unzB2	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)
A	Fumerase	e6unzA3	A: a+b three layers	X: Thioredoxin-like	H: Fumarate hydratase N-terminal domain (From Topology)	T: Fumarate hydratase N-terminal domain	F: Fumerase	ECOD (1.6)
A	Fumerase_C	e6unzA2	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: FumA C-terminal domain-like (From Topology)	T: FumA C-terminal domain-like	F: Fumerase_C	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF05683	Fumarase C-terminus (Fumerase_C)	Fumarase C-terminus	-	Family
A, B, C, D, E A, B, C, D, E, F, G, H	PF05681	Fumarate hydratase (Fumerase) (Fumerase)	Fumarate hydratase (Fumerase)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	fumarate hydratase 2	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity hydro-lyase activity lyase activity catalytic activity fumarate hydratase activity carbon-oxygen lyase activity iron-sulfur cluster binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding identical protein binding protein binding binding protein homodimerization activity protein dimerization activity hydro-lyase activity lyase activity catalytic activity fumarate hydratase activity carbon-oxygen lyase activity iron-sulfur cluster binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy oxoacid metabolic process dicarboxylic acid metabolic process carboxylic acid metabolic process small molecule metabolic process fumarate metabolic process organic acid metabolic process aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy oxoacid metabolic process dicarboxylic acid metabolic process carboxylic acid metabolic process small molecule metabolic process fumarate metabolic process organic acid metabolic process malate metabolic process	membrane-bounded organelle intracellular anatomical structure ciliary plasm cilium cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection cellular anatomical structure organelle cytoplasm cytosol intracellular organelle peroxisome membrane-bounded organelle intracellular anatomical structure ciliary plasm cilium cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection cellular anatomical structure organelle cytoplasm cytosol intracellular organelle peroxisome microbody glycosome intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011167	Iron-dependent fumarate hydratase	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR004646	Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036660	Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR051208	Class-I Fumarase/Tartrate Dehydratase	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR004647	Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.