6TTL
crystal structure of [FeFe]-hydrogenase CbA5H (partial) from Clostridium beijerinckii in Hinact state
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e6ttlA3 | A: alpha bundles | X: Bromodomain-like | H: Nqo1C-terminal domain-like (From Topology) | T: Nqo1C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF02906 | e6ttlA1 | A: a/b three-layered sandwiches | X: Fe-only hydrogenase (From Topology) | H: Fe-only hydrogenase (From Topology) | T: Fe-only hydrogenase | F: PF02906 | ECOD (1.6) |
A | PF02256 | e6ttlA2 | A: extended segments | X: Fe-only hydrogenase smaller subunit (From Topology) | H: Fe-only hydrogenase smaller subunit (From Topology) | T: Fe-only hydrogenase smaller subunit | F: PF02256 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6ttlB3 | A: alpha bundles | X: Bromodomain-like | H: Nqo1C-terminal domain-like (From Topology) | T: Nqo1C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF02906 | e6ttlB1 | A: a/b three-layered sandwiches | X: Fe-only hydrogenase (From Topology) | H: Fe-only hydrogenase (From Topology) | T: Fe-only hydrogenase | F: PF02906 | ECOD (1.6) |
B | PF02256 | e6ttlB2 | A: extended segments | X: Fe-only hydrogenase smaller subunit (From Topology) | H: Fe-only hydrogenase smaller subunit (From Topology) | T: Fe-only hydrogenase smaller subunit | F: PF02256 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02906 | Iron only hydrogenase large subunit, C-terminal domain (Fe_hyd_lg_C) | Iron only hydrogenase large subunit, C-terminal domain | - | Domain | |
PF02256 | Iron hydrogenase small subunit (Fe_hyd_SSU) | Iron hydrogenase small subunit | This family represents the small subunit of the Fe-only hydrogenases EC:1.18.99.1. The subunit is comprised of alternating random coil and alpha helical structures that encompasses the large subunit in a novel protein fold [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017900 | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | Conserved Site | |
IPR004108 | Iron hydrogenase, large subunit, C-terminal | Domain | |
IPR036991 | Iron hydrogenase, small subunit superfamily | Homologous Superfamily | |
IPR019554 | Soluble ligand binding domain | Domain | |
IPR009016 | Iron hydrogenase | Homologous Superfamily | |
IPR017896 | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | Domain | |
IPR013352 | Iron hydrogenase, subset | Domain | |
IPR003149 | Iron hydrogenase, small subunit | Domain |