6THJ

CBDP35 Native structure


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF18341e6thjA2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
BPF18341e6thjB2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
CPF18341e6thjC2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
DPF18341e6thjD2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
EPF18341e6thjE2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
FPF18341e6thjF2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
GPF18341e6thjG2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
HPF18341e6thjH2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
IPF18341e6thjI2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
JPF18341e6thjJ2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
KPF18341e6thjK2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)
LPF18341e6thjL2 A: beta barrelsX: SH3H: SH3T: SH3F: PF18341ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF18341PSA endolysin C-terminal cell wall binding domain (PSA_CBD)PSA endolysin C-terminal cell wall binding domainThis is the C-terminal domain of bacteriophage PSA endolysin. The C-terminal domain is the cell wall-binding domain (CBD) which is composed of two structurally homologous subdomains. CBD comprises two copies of a beta-barrel-like folds, which are hel ...This is the C-terminal domain of bacteriophage PSA endolysin. The C-terminal domain is the cell wall-binding domain (CBD) which is composed of two structurally homologous subdomains. CBD comprises two copies of a beta-barrel-like folds, which are held together by means of swapped beta-strands. The observed structure of the CBD sub-domains from Listeriaphage endolysin (N-acetyl-muramoyl-l-alanine amidase), could be the result of either a gene duplication during evolution of the CBD or the pick-up of another functionally equivalent coding sequence, followed by swapping of the respective ancestral leading beta-strands [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
PlyP35 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR009045Hedgehog signalling/DD-peptidase zinc-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR039561Peptidase M15CDomain
A, B, C, D, E
IPR041341PSA endolysin, cell wall binding domainDomain