6TCI

The crystal structure of SleB N-terminal domain

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF01471e6tciA1 A: alpha arraysX: PGBD-like (From Topology)H: PGBD-like (From Topology)T: PGBD-likeF: PF01471ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01471Putative peptidoglycan binding domain (PG_binding_1)Putative peptidoglycan binding domainThis domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is ...This domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins [3]. The domain is found to bind peptidoglycan experimentally [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Spore cortex-lytic enzyme

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR002477Peptidoglycan binding-likeDomain
IPR036365PGBD-like superfamilyHomologous Superfamily
IPR042047Cell wall hydrolase SleB, domain 1Homologous Superfamily
IPR014224Spore cortex-lytic enzyme SleBFamily
IPR036366PGBD superfamilyHomologous Superfamily
IPR011105Cell wall hydrolase, SleBDomain