6TB9 | pdb_00006tb9

Capsid of native GTA particle computed with C5 symmetry

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth F4]	Phage_capsid	e6tb9F41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
Y [auth E4]	Phage_capsid	e6tb9E41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
X [auth D4]	Phage_capsid	e6tb9D41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
W [auth A4]	Phage_capsid	e6tb9A41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
V [auth I4]	Phage_capsid	e6tb9I41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
U [auth H4]	Phage_capsid	e6tb9H41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
T [auth L4]	Phage_capsid	e6tb9L41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
S [auth V4]	Phage_capsid	e6tb9V41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
R [auth J4]	Phage_capsid	e6tb9J41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
Q [auth K4]	Phage_capsid	e6tb9K41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
P [auth S4]	Phage_capsid	e6tb9S41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
O [auth T4]	Phage_capsid	e6tb9T41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
N [auth U4]	Phage_capsid	e6tb9U41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
M [auth W4]	Phage_capsid	e6tb9W41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
L [auth P4]	Phage_capsid	e6tb9P41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
K [auth O4]	Phage_capsid	e6tb9O41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
J [auth Q4]	Phage_capsid	e6tb9Q41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
I [auth M4]	Phage_capsid	e6tb9M41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
H [auth R4]	Phage_capsid	e6tb9R41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
G [auth N4]	Phage_capsid	e6tb9N41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
F [auth B5]	Phage_capsid	e6tb9B51	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
E [auth A5]	Phage_capsid	e6tb9A51	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
D [auth Z4]	Phage_capsid	e6tb9Z41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
CA [auth C4]	Phage_capsid	e6tb9C41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
C [auth Y4]	Phage_capsid	e6tb9Y41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
BA [auth B4]	Phage_capsid	e6tb9B41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
B [auth X4]	Phage_capsid	e6tb9X41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
AA [auth G4]	Phage_capsid	e6tb9G41	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)
A [auth C5]	Phage_capsid	e6tb9C51	A: a+b three layers	X: Thioredoxin-like	H: Major capsid protein gp5 (From Topology)	T: Major capsid protein gp5	F: Phage_capsid	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], CA [auth C4], D [auth Z4], E [auth A5], F [auth B5], G [auth N4], H [auth R4], I [auth M4], J [auth Q4], K [auth O4], L [auth P4], M [auth W4], N [auth U4], O [auth T4], P [auth S4], Q [auth K4], R [auth J4], S [auth V4], T [auth L4], U [auth H4], V [auth I4], W [auth A4], X [auth D4], Y [auth E4], Z [auth F4]	PF05065	Phage capsid family (Phage_capsid)	Phage capsid family	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], CA [auth C4], D [auth Z4], E [auth A5], F [auth B5], G [auth N4], H [auth R4], I [auth M4], J [auth Q4], K [auth O4], L [auth P4], M [auth W4], N [auth U4], O [auth T4], P [auth S4], Q [auth K4], R [auth J4], S [auth V4], T [auth L4], U [auth H4], V [auth I4], W [auth A4], X [auth D4], Y [auth E4], Z [auth F4]	IPR054612	Phage capsid-like, C-terminal	Domain
A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], CA [auth C4], D [auth Z4], E [auth A5], F [auth B5], G [auth N4], H [auth R4], I [auth M4], J [auth Q4], K [auth O4], L [auth P4], M [auth W4], N [auth U4], O [auth T4], P [auth S4], Q [auth K4], R [auth J4], S [auth V4], T [auth L4], U [auth H4], V [auth I4], W [auth A4], X [auth D4], Y [auth E4], Z [auth F4]	IPR024455	Phage capsid	Family