6T9M | pdb_00006t9m

Crystal structure of the Chitinase Domain of the Spore Coat Protein CotE from Clostridium difficile

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth AAA]	Arf, G-alpha	e6t9mAAA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Arf, G-alpha	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA]	PF00704	Glycosyl hydrolases family 18 (Glyco_hydro_18)	Glycosyl hydrolases family 18		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA]	Peroxiredoxin	chitinase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity endochitinase activity peroxidase activity oxidoreductase activity thioredoxin-dependent peroxiredoxin activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor peroxiredoxin activity chitin binding binding chitinase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity endochitinase activity peroxidase activity oxidoreductase activity thioredoxin-dependent peroxiredoxin activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor peroxiredoxin activity chitin binding binding carbohydrate derivative binding	carbohydrate metabolic process primary metabolic process metabolic process cellular process carbohydrate derivative catabolic process catabolic process carbohydrate derivative metabolic process chitin metabolic process aminoglycan catabolic process macromolecule catabolic process glucosamine-containing compound catabolic process amino sugar catabolic process aminoglycan metabolic process amino sugar metabolic process carbohydrate metabolic process primary metabolic process metabolic process cellular process carbohydrate derivative catabolic process catabolic process carbohydrate derivative metabolic process chitin metabolic process aminoglycan catabolic process macromolecule catabolic process glucosamine-containing compound catabolic process amino sugar catabolic process aminoglycan metabolic process amino sugar metabolic process macromolecule metabolic process chitin catabolic process	cellular anatomical structure extracellular region intracellular anatomical structure cytoplasm
B [auth BBB]	Peptide in active site	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA]	IPR019479	Peroxiredoxin, C-terminal	Domain
A [auth AAA]	IPR029070	Chitinase insertion domain superfamily	Homologous Superfamily
A [auth AAA]	IPR050314	Glycosyl hydrolase family 18	Family
A [auth AAA]	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A [auth AAA]	IPR001579	Glycosyl hydrolase family 18, active site	Active Site
A [auth AAA]	IPR013766	Thioredoxin domain	Domain
A [auth AAA]	IPR022915	Peroxiredoxin, TDXH subfamily	Family
A [auth AAA]	IPR001223	Glycoside hydrolase family 18, catalytic domain	Domain
A [auth AAA]	IPR011583	Chitinase II/V-like, catalytic domain	Domain
A [auth AAA]	IPR045020	1-Cys peroxiredoxin	Family
A [auth AAA]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A [auth AAA]	IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.