Annotations: 6T8E

Crystal structure of native xylose isomerase from Piromyces E2 grown in yeast, in complex with xylose

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d6t8ed_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Xylose isomerase-like	automated matches	automated matches	(Piromyces sp. E2 ) [TaxId: 73868 ],	SCOPe (2.08)
C	d6t8ec_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Xylose isomerase-like	automated matches	automated matches	(Piromyces sp. E2 ) [TaxId: 73868 ],	SCOPe (2.08)
B	d6t8eb_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Xylose isomerase-like	automated matches	automated matches	(Piromyces sp. E2 ) [TaxId: 73868 ],	SCOPe (2.08)
A	d6t8ea_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Xylose isomerase-like	automated matches	automated matches	(Piromyces sp. E2 ) [TaxId: 73868 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Cytochrome_C554	e6t8eD1	A: alpha arrays	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Cytochrome_C554	ECOD (v295)
C	Cytochrome_C554	e6t8eC1	A: alpha arrays	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Cytochrome_C554	ECOD (v295)
B	Cytochrome_C554	e6t8eB1	A: alpha arrays	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Cytochrome_C554	ECOD (v295)
A	Cytochrome_C554	e6t8eA1	A: alpha arrays	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Cytochrome_C554	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.20.20.150	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Divalent-metal-dependent TIM barrel enzymes	CATH (utative)
C	3.20.20.150	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Divalent-metal-dependent TIM barrel enzymes	CATH (utative)
B	3.20.20.150	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Divalent-metal-dependent TIM barrel enzymes	CATH (utative)
A	3.20.20.150	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Divalent-metal-dependent TIM barrel enzymes	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Xylose isomerase	isomerase activity intramolecular oxidoreductase activity, interconverting aldoses and ketoses intramolecular oxidoreductase activity xylose isomerase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR013022	Xylose isomerase-like, TIM barrel domain	Domain
A, B, C, D	IPR013452	Xylose isomerase, bacterial-type	Family
A, B, C, D	IPR036237	Xylose isomerase-like superfamily	Homologous Superfamily
A, B, C, D	IPR001998	Xylose isomerase	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.