6SHQ
Escherichia coli AGPase in complex with AMP. Symmetry C2
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e6shqA1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00483 | e6shqA2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
B [auth D] | F_UNCLASSIFIED | e6shqD1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth D] | PF00483 | e6shqD2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
C | F_UNCLASSIFIED | e6shqC2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF00483 | e6shqC1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
D [auth B] | F_UNCLASSIFIED | e6shqB2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth B] | PF00483 | e6shqB1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (utative) |
A | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (utative) |
B [auth D] | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (utative) |
B [auth D] | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (utative) |
C | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (utative) |
C | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (utative) |
D [auth B] | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (utative) |
D [auth B] | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth D], C, D [auth B] | PF00483 | Nucleotidyl transferase (NTP_transferase) | Nucleotidyl transferase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth D], C, D [auth B] | IPR011831 | Glucose-1-phosphate adenylyltransferase | Family |
A, B [auth D], C, D [auth B] | IPR005836 | ADP-glucose pyrophosphorylase, conserved site | Conserved Site |
A, B [auth D], C, D [auth B] | IPR023049 | Glucose-1-phosphate adenylyltransferase GlgC, bacterial | Family |
A, B [auth D], C, D [auth B] | IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily |
A, B [auth D], C, D [auth B] | IPR005835 | Nucleotidyl transferase domain | Domain |
A, B [auth D], C, D [auth B] | IPR029044 | Nucleotide-diphospho-sugar transferases | Homologous Superfamily |