6SH1 | pdb_00006sh1

Crystal structure of substrate-free human neprilysin E584D.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth CCC]	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8035463	3001975	SCOP2B (2022-06-29)
A [auth AAA]	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8035463	3001975	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth CCC]	Cas9_PI2	e6sh1CCC1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: Cas9_PI2	ECOD (v295.2)
A [auth AAA]	Peptidase_M13,Peptidase_M13_N	e6sh1AAA1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: Peptidase_M13,Peptidase_M13_N	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA], B [auth CCC]	PF05649	Peptidase family M13 (Peptidase_M13_N)	Peptidase family M13	-	Family
A [auth AAA], B [auth CCC]	PF01431	Peptidase family M13 (Peptidase_M13)	Peptidase family M13	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA], B [auth CCC]	Neprilysin	ion binding binding anion binding phosphatidylglycerol binding phospholipid binding lipid binding cardiolipin binding small molecule binding peptidase activity catalytic activity, acting on a protein metallocarboxypeptidase activity hydrolase activity metallopeptidase activity exopeptidase activity ion binding binding anion binding phosphatidylglycerol binding phospholipid binding lipid binding cardiolipin binding small molecule binding peptidase activity catalytic activity, acting on a protein metallocarboxypeptidase activity hydrolase activity metallopeptidase activity exopeptidase activity catalytic activity metalloexopeptidase activity carboxypeptidase activity endopeptidase activity modified amino acid binding phosphatidylserine binding metalloendopeptidase activity identical protein binding protein binding protein homodimerization activity protein dimerization activity oligopeptidase activity peptide binding cation binding transition metal ion binding zinc ion binding metal ion binding	multicellular organismal process catabolic process amyloid-beta metabolic process amyloid-beta clearance by cellular catabolic process metabolic process cellular process amyloid-beta clearance developmental process placenta development animal organ development anatomical structure development animal gross anatomical part developmental process replicative senescence cell cycle multicellular organismal process catabolic process amyloid-beta metabolic process amyloid-beta clearance by cellular catabolic process metabolic process cellular process amyloid-beta clearance developmental process placenta development animal organ development anatomical structure development animal gross anatomical part developmental process replicative senescence cell cycle cell cycle process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process neuropeptide catabolic process substance P catabolic process peptide metabolic process peptide catabolic process creatinine metabolic process small molecule metabolic process lactam metabolic process cellular response to stimulus response to light stimulus response to stimulus cellular response to radiation response to UV response to UV-B cellular response to environmental stimulus cellular response to UV-B cellular response to light stimulus response to radiation response to abiotic stimulus cellular response to abiotic stimulus cellular response to UV positive regulation of nervous system development regulation of cellular process regulation of developmental process cellular developmental process positive regulation of biological process cell development regulation of cell differentiation regulation of neurogenesis regulation of cell development regulation of nervous system development positive regulation of developmental process multicellular organism development neurogenesis positive regulation of cell differentiation cell differentiation positive regulation of neurogenesis regulation of multicellular organismal process positive regulation of cellular process system development regulation of multicellular organismal development regulation of biological process biological regulation positive regulation of cell development nervous system development positive regulation of multicellular organismal process bradykinin catabolic process kidney development renal system development regulation of systemic arterial blood pressure by renin-angiotensin regulation of systemic arterial blood pressure by hormone peptide hormone processing regulation of systemic arterial blood pressure mediated by a chemical signal system process signaling receptor ligand precursor processing protein maturation circulatory system process proteolysis regulation of biological quality blood circulation regulation of blood pressure regulation of hormone levels regulation of systemic arterial blood pressure by circulatory renin-angiotensin gene expression macromolecule biosynthetic process hormone metabolic process regulation of systemic arterial blood pressure endocrine process biosynthetic process regulation of angiotensin levels in blood protein processing angiotensin maturation response to hormone response to endogenous stimulus response to chemical response to estrogen positive regulation of cell communication modulation of chemical synaptic transmission signaling cell communication long-term synaptic potentiation synaptic signaling positive regulation of long-term synaptic potentiation regulation of synaptic plasticity trans-synaptic signaling regulation of signaling cell-cell signaling positive regulation of synaptic transmission chemical synaptic transmission regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of long-term synaptic potentiation regulation of cell communication positive regulation of signaling tube development respiratory tube development lung development respiratory system development neuropeptide processing behavior learning or memory nervous system process cognition hormone catabolic process sensory perception sensory perception of pain cellular response to UV-A response to UV-A response to peptide response to cytokine cellular response to cytokine stimulus	cellular anatomical structure membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle apical part of cell cluster of actin-based cell projections brush border somatodendritic compartment cellular anatomical structure membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle apical part of cell cluster of actin-based cell projections brush border somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection intracellular anatomical structure cytoplasm Golgi apparatus subcompartment Golgi apparatus organelle subcompartment intracellular membrane-bounded organelle endomembrane system intracellular organelle trans-Golgi network cell body neuronal cell body axon transport vesicle synapse intracellular vesicle presynapse cytoplasmic vesicle synaptic vesicle cell junction secretory vesicle exocytic vesicle anchoring junction focal adhesion cell-substrate junction cell surface cell periphery plasma membrane membrane microdomain membrane raft early endosome endosome neuron projection terminus cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane secretory granule organelle membrane secretory granule membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA], B [auth CCC]	IPR018497	Peptidase M13, C-terminal domain	Domain
A [auth AAA], B [auth CCC]	IPR008753	Peptidase M13, N-terminal domain	Domain
A [auth AAA], B [auth CCC]	IPR000718	Peptidase M13	Family
A [auth AAA], B [auth CCC]	IPR024079	Metallopeptidase, catalytic domain superfamily	Homologous Superfamily
A [auth AAA], B [auth CCC]	IPR042089	Peptidase M13, domain 2	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth AAA], B [auth CCC]	: P08473	Charcot-Marie-Tooth disease autosomal dominant cerebellar ataxia Charcot-Marie-Tooth disease axonal type 2T breast carcinoma prostate cancer kidney failure diabetic autonomic neuropathy diabetic neuropathy Liver Cirrhosis, Experimental breast cancer cryopyrin-associated periodic syndrome diabetic polyneuropathy peripheral neuropathy spinocerebellar ataxia 43 periodontitis Charcot-Marie-Tooth disease autosomal dominant cerebellar ataxia Charcot-Marie-Tooth disease axonal type 2T breast carcinoma prostate cancer kidney failure diabetic autonomic neuropathy diabetic neuropathy Liver Cirrhosis, Experimental breast cancer cryopyrin-associated periodic syndrome diabetic polyneuropathy peripheral neuropathy spinocerebellar ataxia 43 periodontitis ductal breast carcinoma in situ hereditary ataxia spinocerebellar ataxia type 1 idiopathic membranous glomerulonephritis spinocerebellar ataxia type 5 acute diarrhea spondyloarthropathy lung cancer ulcerative colitis cancer lymphatic system disease membranous glomerulonephritis cystic fibrosis myopathy osteosarcoma peripheral nervous system disease facioscapulohumeral muscular dystrophy spinocerebellar ataxia type 2 invasive ductal breast carcinoma spinocerebellar ataxia type 6 acute myeloid leukemia lung carcinoma cerebellar ataxia malignant colon neoplasm motor peripheral neuropathy neurodegenerative disease pancreatic intraductal papillary-mucinous carcinoma familial cold autoinflammatory syndrome hypertensive disorder spinocerebellar ataxia type 4 kidney disease spinocerebellar ataxia type 7 lung adenocarcinoma transitional cell carcinoma malignant mesothelioma cutaneous lupus erythematosus Muckle-Wells syndrome non-small cell lung carcinoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.