Rabbit 80S ribosome stalled on a poly(A) tail
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth C1] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053216 | 3002166 | SCOP2B (2022-06-29) |
| F [auth F1] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8052745 | 3001473 | SCOP2B (2022-06-29) |
| F [auth F1] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8052747 | 3000334 | SCOP2B (2022-06-29) |
| F [auth F1] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052746 | 3000135 | SCOP2B (2022-06-29) |
| G [auth G1] | SCOP2B Superfamily | Ribosomal protein S7 | 8066001 | 3000799 | SCOP2B (2022-06-29) |
| J [auth J1] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8053075 | 3000433 | SCOP2B (2022-06-29) |
| L [auth L1] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055720 | 3000034 | SCOP2B (2022-06-29) |
| M [auth M1] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052707 | 3000135 | SCOP2B (2022-06-29) |
| M [auth M1] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052708 | 3002138 | SCOP2B (2022-06-29) |
| N [auth N1] | SCOP2B Superfamily | L30e-like | 8063980 | 3001739 | SCOP2B (2022-06-29) |
| O [auth O1] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052971 | 3001284 | SCOP2B (2022-06-29) |
| O [auth O1] | SCOP2B Superfamily | Homeodomain-like | 8052970 | 3000001 | SCOP2B (2022-06-29) |
| R [auth R1] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8082683 | 3000100 | SCOP2B (2022-06-29) |
| T [auth T1] | SCOP2B Superfamily | S13-like H2TH domain | 8101439 | 3000053 | SCOP2B (2022-06-29) |
| U [auth U1] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8089322 | 3000034 | SCOP2B (2022-06-29) |
| V [auth V1] | SCOP2B Superfamily | Ribosomal protein S10 | 8097814 | 3001336 | SCOP2B (2022-06-29) |
| X [auth X1] | SCOP2B Superfamily | Ribosomal protein S8 | 8079081 | 3000709 | SCOP2B (2022-06-29) |
| AA [auth a1] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8090991 | 3000034 | SCOP2B (2022-06-29) |
| DA [auth d1] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8095265 | 3000135 | SCOP2B (2022-06-29) |
| EA [auth e1] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052584 | 3000068 | SCOP2B (2022-06-29) |
| FA [auth f1] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053455 | 3002190 | SCOP2B (2022-06-29) |
| KA [auth B2] | SCOP2B Superfamily | Translational proteins | 8078357 | 3000811 | SCOP2B (2022-06-29) |
| RA [auth I2] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8097320 | 3000884 | SCOP2B (2022-06-29) |
| SA [auth J2] | SCOP2B Superfamily | RL5-like | 8073894 | 3001709 | SCOP2B (2022-06-29) |
| VA [auth N2] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8082477 | 3000210 | SCOP2B (2022-06-29) |
| DB [auth V2] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072048 | 3000433 | SCOP2B (2022-06-29) |
| FB [auth X2] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8095966 | 3000210 | SCOP2B (2022-06-29) |
| GB [auth Y2] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8076754 | 3000334 | SCOP2B (2022-06-29) |
| HB [auth Z2] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8053047 | 3000334 | SCOP2B (2022-06-29) |
| IB [auth a2] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8097818 | 3001045 | SCOP2B (2022-06-29) |
| KB [auth c2] | SCOP2B Superfamily | L30e-like | 8094953 | 3001739 | SCOP2B (2022-06-29) |
| MB [auth e2] | SCOP2B Superfamily | Ribosomal protein L32e | 8102088 | 3000982 | SCOP2B (2022-06-29) |
| NB [auth f2] | SCOP2B Superfamily | Translational proteins | 8093714 | 3000811 | SCOP2B (2022-06-29) |
| QB [auth i2] | SCOP2B Superfamily | Ribosomal protein L36e | 8053119 | 3002161 | SCOP2B (2022-06-29) |
| SB [auth k2] | SCOP2B Superfamily | Ribosomal L38e protein-like | 8093716 | 3002206 | SCOP2B (2022-06-29) |
| TB [auth l2] | SCOP2 Family | ribosomal protein l39e | 8095596 | 4001518 | SCOP2 (2022-06-29) |
| TB [auth l2] | SCOP2 Superfamily | Ribosomal protein L39e | 8095597 | 3001756 | SCOP2 (2022-06-29) |
| XB [auth p2] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8101435 | 3001320 | SCOP2B (2022-06-29) |
| FC [auth B] | SCOP2B Superfamily | Ribosomal protein L1p/L10e-like | 8065344 | 3001911 | SCOP2B (2022-06-29) |
| OB [auth g2] | SCOP2B Superfamily | Ribosomal protein L34e-like | 8103328 | 3002203 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth B1] | ATP-synt | e6sgcB11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| C [auth C1] | ATP-synt | e6sgcC11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| D [auth D1] | ATP-synt | e6sgcD11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| E [auth E1] | ATP-synt | e6sgcE11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| F [auth F1] | ATP-synt | e6sgcF11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| G [auth G1] | ATP-synt | e6sgcG11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| H [auth H1] | ATP-synt | e6sgcH11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| I [auth I1] | ATP-synt | e6sgcI11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| J [auth J1] | ATP-synt | e6sgcJ11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| K [auth K1] | ATP-synt | e6sgcK11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| L [auth L1] | ATP-synt | e6sgcL11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| M [auth M1] | ATP-synt | e6sgcM11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| N [auth N1] | ATP-synt | e6sgcN11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| O [auth O1] | ATP-synt | e6sgcO11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| P [auth P1] | ATP-synt | e6sgcP11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| Q [auth Q1] | ATP-synt | e6sgcQ11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| R [auth R1] | ATP-synt | e6sgcR11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| S [auth S1] | ATP-synt | e6sgcS11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| T [auth T1] | ATP-synt | e6sgcT11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| U [auth U1] | ATP-synt | e6sgcU11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| V [auth V1] | ATP-synt | e6sgcV11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| W [auth W1] | ATP-synt | e6sgcW11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| X [auth X1] | ATP-synt | e6sgcX11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| Y [auth Y1] | ATP-synt | e6sgcY11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| Z [auth Z1] | ATP-synt | e6sgcZ11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| AA [auth a1] | ATP-synt | e6sgca11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| BA [auth b1] | ATP-synt | e6sgcb11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| CA [auth c1] | ATP-synt | e6sgcc11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| DA [auth d1] | ATP-synt | e6sgcd11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| EA [auth e1] | ATP-synt | e6sgce11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| FA [auth f1] | ATP-synt | e6sgcf11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| GA [auth g1] | ATP-synt | e6sgcg11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| HA [auth h1] | ATP-synt | e6sgch11 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| JA [auth A2] | ATP-synt | e6sgcA21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| KA [auth B2] | ATP-synt | e6sgcB21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| LA [auth C2] | Ald_deCOase | e6sgcC21 | A: alpha bundles | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (develop294) |
| MA [auth D2] | ATP-synt | e6sgcD21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| NA [auth E2] | ATP-synt | e6sgcE21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| OA [auth F2] | ATP-synt | e6sgcF21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| PA [auth G2] | ATP-synt | e6sgcG21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| QA [auth H2] | ATP-synt | e6sgcH21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| RA [auth I2] | ATP-synt | e6sgcI21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| SA [auth J2] | ATP-synt | e6sgcJ21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| TA [auth L2] | ATP-synt | e6sgcL21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| UA [auth M2] | ATP-synt | e6sgcM21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| VA [auth N2] | ATP-synt | e6sgcN21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| WA [auth O2] | ATP-synt | e6sgcO21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| XA [auth P2] | ATP-synt | e6sgcP21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| YA [auth Q2] | ATP-synt | e6sgcQ21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| ZA [auth R2] | ATP-synt | e6sgcR21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| AB [auth S2] | ATP-synt | e6sgcS21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| BB [auth T2] | ATP-synt | e6sgcT21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| CB [auth U2] | ATP-synt | e6sgcU21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| DB [auth V2] | ATP-synt | e6sgcV21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| EB [auth W2] | ATP-synt | e6sgcW21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| FB [auth X2] | ATP-synt | e6sgcX21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| GB [auth Y2] | ATP-synt | e6sgcY21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| HB [auth Z2] | ATP-synt | e6sgcZ21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| IB [auth a2] | ATP-synt | e6sgca21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| JB [auth b2] | ATP-synt | e6sgcb21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| KB [auth c2] | ATP-synt | e6sgcc21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| LB [auth d2] | ATP-synt | e6sgcd21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| MB [auth e2] | ATP-synt | e6sgce21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| NB [auth f2] | ATP-synt | e6sgcf21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| PB [auth h2] | ATP-synt | e6sgch21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| QB [auth i2] | ATP-synt | e6sgci21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| RB [auth j2] | ATP-synt | e6sgcj21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| SB [auth k2] | ATP-synt | e6sgck21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| TB [auth l2] | ATP-synt | e6sgcl21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| UB [auth m2] | ATP-synt | e6sgcm21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| VB [auth n2] | ATP-synt | e6sgcn21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| WB [auth o2] | ATP-synt | e6sgco21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| XB [auth p2] | ATP-synt | e6sgcp21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| YB [auth r2] | ATP-synt | e6sgcr21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| ZB [auth s2] | ATP-synt | e6sgcs21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| AC [auth t2] | ATP-synt | e6sgct21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| FC [auth B] | ATP-synt | e6sgcB1 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
| OB [auth g2] | ATP-synt | e6sgcg21 | A: alpha bundles | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth C1] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
| D [auth D1] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | Domain | |
| E [auth E1] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| E [auth E1] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| E [auth E1] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| F [auth F1] | PF00900 | Ribosomal family S4e (Ribosomal_S4e) | Ribosomal family S4e | - | Family |
| F [auth F1] | PF16121 | 40S ribosomal protein S4 C-terminus (40S_S4_C) | 40S ribosomal protein S4 C-terminus | - | Family |
| F [auth F1] | PF08071 | RS4NT (NUC023) domain (RS4NT) | RS4NT (NUC023) domain | This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. | Domain |
| F [auth F1] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| G [auth G1] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| G [auth G1] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| H [auth H1] | PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family |
| H [auth H1] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| I [auth I1] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| J [auth J1] | PF01201 | Ribosomal protein S8e (Ribosomal_S8e) | Ribosomal protein S8e | - | Family |
| K [auth K1] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| K [auth K1] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| L [auth L1] | PF03501 | Plectin/S10 domain (S10_plectin) | Plectin/S10 domain | This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. | Domain |
| M [auth M1] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| M [auth M1] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
| N [auth N1] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| O [auth O1] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| Q [auth Q1] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| R [auth R1] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| T [auth T1] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| U [auth U1] | PF01090 | Ribosomal protein S19e (Ribosomal_S19e) | Ribosomal protein S19e | - | Family |
| V [auth V1] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| X [auth X1] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| JA [auth A2] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| JA [auth A2] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| LA [auth C2] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| MA [auth D2] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| MA [auth D2] | PF01198 | Ribosomal protein L31e (Ribosomal_L31e) | Ribosomal protein L31e | - | Family |
| MA [auth D2] | PF14204 | Ribosomal L18 C-terminal region (Ribosomal_L18_c) | Ribosomal L18 C-terminal region | This domain is the C-terminal end of ribosomal L18/L5 proteins. | Domain |
| NA [auth E2] | PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family |
| NA [auth E2] | PF01159 | Ribosomal protein L6e (Ribosomal_L6e) | Ribosomal protein L6e | - | Family |
| OA [auth F2] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| OA [auth F2] | PF01247 | Ribosomal protein L35Ae (Ribosomal_L35Ae) | Ribosomal protein L35Ae | This entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. | Domain |
| QA [auth H2] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| QA [auth H2] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| RA [auth I2] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| RA [auth I2] | PF01158 | Ribosomal protein L36e (Ribosomal_L36e) | Ribosomal protein L36e | - | Family |
| SA [auth J2] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| SA [auth J2] | PF01907 | Ribosomal protein L37e (Ribosomal_L37e) | Ribosomal protein L37e | - | Family |
| SA [auth J2] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| TA [auth L2] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| UA [auth M2] | PF01929 | Ribosomal protein L14 (Ribosomal_L14e) | Ribosomal protein L14 | - | Family |
| VA [auth N2] | PF05162 | Ribosomal protein L41 (Ribosomal_L41) | Ribosomal protein L41 | - | Family |
| VA [auth N2] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| WA [auth O2] | PF00935 | Ribosomal protein L44 (Ribosomal_L44) | Ribosomal protein L44 | - | Family |
| XA [auth P2] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| XA [auth P2] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| ZA [auth R2] | PF01778 | Ribosomal L28e protein family (Ribosomal_L28e) | Ribosomal L28e protein family | - | Family |
| BB [auth T2] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| BB [auth T2] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| DB [auth V2] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| EB [auth W2] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| FB [auth X2] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| GB [auth Y2] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| GB [auth Y2] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| HB [auth Z2] | PF01777 | Ribosomal L27e protein family (Ribosomal_L27e) | Ribosomal L27e protein family | - | Family |
| HB [auth Z2] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| FC [auth B] | PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |














