Skip to main content

 6S5S | pdb_00006s5s

Cfucosylated second generation peptide dendrimer SBD8 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.43 Angstrom resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCalcium-mediated lectin 8042940 3001391 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AV-sete6s5sA1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: V-setECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.400 Mainly Beta Sandwich Jelly Rolls Calcium-mediated lectinCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07472Fucose-binding lectin II (PA-IIL) (PA-IIL)Fucose-binding lectin II (PA-IIL)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
SBD8 chain D---
C, E
SBD8 chain C---
SBD8 chain B---
Fucose-binding lectin -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036684Calcium-mediated lectin superfamilyHomologous Superfamily
IPR010907Calcium-mediated lectinDomain
IPR016927Lectin, sugar-bindingFamily