6S4D | pdb_00006s4d

Crystal Structure of the Homospermidine Synthase (HSS) variant W229F from Blastochloris viridis in Complex with NAD

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRE_SinIe6s4dB1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RE_SinIECOD (develop294)
ARE_SinIe6s4dA1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RE_SinIECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
B3.30.360.30 Alpha Beta 2-Layer Sandwich Dihydrodipicolinate Reductase domain 2CATH (utative)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
A3.30.360.30 Alpha Beta 2-Layer Sandwich Dihydrodipicolinate Reductase domain 2CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Homospermidine synthase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR005097Saccharopine dehydrogenase, NADP binding domainDomain
A, B
IPR023181Homospermidine synthase-like, C-terminalHomologous Superfamily
A, B
IPR032095Saccharopine dehydrogenase-like, C-terminalDomain