6RTD | pdb_00006rtd

Dihydro-heme d1 dehydrogenase NirN in complex with DHE

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BCytochrom_D1e6rtdB1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: Cytochrom_D1ECOD (1.6)
BCytochrome_CBB3e6rtdB2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrome_CBB3ECOD (1.6)
ACytochrom_D1e6rtdA1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: Cytochrom_D1ECOD (1.6)
ACytochrome_CBB3e6rtdA2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrome_CBB3ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF02239Cytochrome D1 heme domain (Cytochrom_D1)Cytochrome D1 heme domain- Repeat
A, B
PF13442Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3)Cytochrome C oxidase, cbb3-type, subunit IIIDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Cytochrome c

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
A, B
IPR011048Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamilyHomologous Superfamily
A, B
IPR009056Cytochrome c-like domainDomain
A, B
IPR003143Cytochrome cd1-nitrite reductase, C-terminal domain superfamilyHomologous Superfamily
A, B
IPR051200Multi-functional host-pathogen interaction and enzymatic activity proteinFamily