6RMQ

Crystal structure of a selenomethionine-substituted A70M I84M mutant of the essential repressor DdrO from radiation resistant-Deinococcus bacteria (Deinococcus deserti)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF01381e6rmqA1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: PF01381ECOD (1.6)
AF_UNCLASSIFIEDe6rmqA2 A: alpha arraysX: DdrO C-terminal domain (From Topology)H: DdrO C-terminal domain (From Topology)T: DdrO C-terminal domainF: F_UNCLASSIFIEDECOD (1.6)
BPF01381e6rmqB1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: PF01381ECOD (1.6)
BF_UNCLASSIFIEDe6rmqB2 A: alpha arraysX: DdrO C-terminal domain (From Topology)H: DdrO C-terminal domain (From Topology)T: DdrO C-terminal domainF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01381Helix-turn-helix (HTH_3)Helix-turn-helixThis large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be ...This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
HTH-type transcriptional regulator DdrOC - -

InterPro: Protein Family Classification InterPro Database Homepage