6RAS
Pmar-Lig_Pre.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth I] | PF14743 | e6rasI4 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF14743 | ECOD (1.6) |
D [auth I] | F_UNCLASSIFIED | e6rasI2 | A: alpha bundles | X: ATP-dependent DNA ligase DNA-binding domain (From Topology) | H: ATP-dependent DNA ligase DNA-binding domain (From Topology) | T: ATP-dependent DNA ligase DNA-binding domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth I] | PF01068 | e6rasI3 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: ATP-grasp | F: PF01068 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
D [auth I] | PF01068 | ATP dependent DNA ligase domain (DNA_ligase_A_M) | ATP dependent DNA ligase domain | This domain belongs to a more diverse superfamily, including Pfam:PF01331 and Pfam:PF01653 [3]. | Domain |
D [auth I] | PF14743 | DNA ligase OB-like domain (DNA_ligase_OB_2) | DNA ligase OB-like domain | This domain has an OB-like fold, but does not appear to be related to Pfam:PF03120. It is found at the C-terminus of the ATP dependent DNA ligase domain Pfam:PF01068 [1-3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
D [auth I] | IPR016059 | DNA ligase, ATP-dependent, conserved site | Conserved Site |
D [auth I] | IPR012310 | DNA ligase, ATP-dependent, central | Domain |
D [auth I] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
D [auth I] | IPR029319 | DNA ligase, OB-like domain | Domain |