6R7B | pdb_00006r7b

Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 1


Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.40.50.10640 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold SSO1389-likeCATH (utative)
B3.40.50.10640 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold SSO1389-likeCATH (utative)
A3.40.50.10640 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold SSO1389-likeCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF22230CRISPR system endoribonuclease Csx1, CARF domain (Csx1_CARF)CRISPR system endoribonuclease Csx1, CARF domainCRISPR system endoribonuclease Csx1 is a metal-independent, endoribonuclease that acts selectively on ssRNA and cleaves specifically after adenosines, as part of the type III-B CRISP-Cas system and it is homologous to Csm6 [1-3], sharing the same dom ...CRISPR system endoribonuclease Csx1 is a metal-independent, endoribonuclease that acts selectively on ssRNA and cleaves specifically after adenosines, as part of the type III-B CRISP-Cas system and it is homologous to Csm6 [1-3], sharing the same domain domain architecture consisting of a CARF domain at the N-terminal that is relatively well conserved, and a HEPN nuclease domain at the C-terminal. This entry represents the CARF (CRISPR-associated Rossmann fold) domain, which binds and cleaves the cyclic oligoadenylate molecule (cA) that then activates the HEPN domain.
Domain

InterPro: Protein Family Classification InterPro Database Homepage