6QPO
Adenovirus species D serotype 49 Fiber-Knob KO1 mutant
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Virus attachment protein globular domain | 8099124 | 3001376 | SCOP2B (2022-06-29) |
E | SCOP2 Family | Adenovirus fiber protein knob domain | 8099123 | 4002523 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Virus attachment protein globular domain | 8099124 | 3001376 | SCOP2 (2022-06-29) |
A | SCOP2B Superfamily | Virus attachment protein globular domain | 8099124 | 3001376 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Virus attachment protein globular domain | 8099124 | 3001376 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Virus attachment protein globular domain | 8099124 | 3001376 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Virus attachment protein globular domain | 8099124 | 3001376 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF00541 | e6qpoC1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
E | PF00541 | e6qpoE1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
A | PF00541 | e6qpoA1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
B | PF00541 | e6qpoB1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
D | PF00541 | e6qpoD1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
F | PF00541 | e6qpoF1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00541 | Adenoviral fibre protein (knob domain) (Adeno_knob) | Adenoviral fibre protein (knob domain) | Specific attachment of adenovirus is achieved through interactions between host-cell receptors and the adenovirus fibre protein and is mediated by the globular carboxy-terminal domain of the adenovirus fibre protein, termed the carboxy-terminal kn ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
IPR000978 | Adenoviral fibre protein, knob | Domain | |
IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat |