Crystal structure of the site-specific DNA nickase N.BspD6I E418A Mutant
External Resource: Annotation
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
| A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053985 | 3000034 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Restriction endonuclease-like | 8053982 | 3000104 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053984 | 3000034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053985 | 3000034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053984 | 3000034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Restriction endonuclease-like | 8053982 | 3000104 | SCOP2B (2022-06-29) |
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
| A | RE_AlwI_1st | e6qnzA3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: RE_AlwI_1st | ECOD (1.6) |
| A | RE_AlwI_like | e6qnzA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: RE_AlwI_like | ECOD (1.6) |
| A | EUF08145 | e6qnzA4 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Helical linker domain in nicking endonuclease N.BspD6I (From Topology) | T: Helical linker domain in nicking endonuclease N.BspD6I | F: EUF08145 | ECOD (1.6) |
| A | RE_AlwI_2nd | e6qnzA2 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: RE_AlwI_2nd | ECOD (1.6) |
| B | RE_AlwI_1st | e6qnzB4 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: RE_AlwI_1st | ECOD (1.6) |
| B | RE_AlwI_like | e6qnzB2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: RE_AlwI_like | ECOD (1.6) |
| B | EUF08145 | e6qnzB3 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Helical linker domain in nicking endonuclease N.BspD6I (From Topology) | T: Helical linker domain in nicking endonuclease N.BspD6I | F: EUF08145 | ECOD (1.6) |
| B | RE_AlwI_2nd | e6qnzB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: RE_AlwI_2nd | ECOD (1.6) |
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|
| Heterodimeric restriction endonuclease R.BspD6I large subunit | | - | - |