6QC7 | pdb_00006qc7

Ovine respiratory complex I FRC open class 3


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
X [auth D2]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8054160 3002280 SCOP2B (2022-06-29)
X [auth D2]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8047670 3002280 SCOP2B (2022-06-29)
W [auth D4]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8048501 3002280 SCOP2B (2022-06-29)
W [auth D4]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8054155 3002280 SCOP2B (2022-06-29)
V [auth D5]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8048258 3002280 SCOP2B (2022-06-29)
V [auth D5]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8047664 3002280 SCOP2B (2022-06-29)
U [auth 4L]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8053514 3002200 SCOP2B (2022-06-29)
T [auth D6]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8053518 3002200 SCOP2B (2022-06-29)
S [auth D1]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8054146 3002280 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth S6]e6qc7S61 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
G [auth S8]e6qc7S81 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
F [auth S7]e6qc7S71 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
E [auth S3]e6qc7S31 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
SA [auth A1]e6qc7A11 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
RA [auth B1]e6qc7B11 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
QA [auth C1]e6qc7C11 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
NA [auth B2]e6qc7B21 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
MA [auth B9]e6qc7B91 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
JA [auth AM]e6qc7AM1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
HA [auth C2]e6qc7C21 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
FA [auth A3]e6qc7A31 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
EA [auth S5]e6qc7S51 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
C [auth S1]e6qc7S11 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
DA [auth AJ]e6qc7AJ1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
CA [auth BJ]e6qc7BJ1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
BA [auth A8]e6qc7A81 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
Z [auth B5]e6qc7B51 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
X [auth D2]e6qc7D21 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
W [auth D4]e6qc7D41 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
V [auth D5]e6qc7D51 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
U [auth 4L]e6qc74L1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
T [auth D6]e6qc7D61 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
B [auth V2]e6qc7V21 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
S [auth D1]e6qc7D11 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
R [auth D3]e6qc7D31 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
Q [auth AA]e6qc7AA1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
AA [auth AB]e6qc7AB1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
P [auth AL]e6qc7AL1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
N [auth A6]e6qc7A61 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
M [auth A5]e6qc7A51 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
L [auth A2]e6qc7A21 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
K [auth A9]e6qc7A91 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
J [auth S4]e6qc7S41 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)
A [auth V1]e6qc7V11 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: ubiquitinF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
X [auth D2]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
X [auth D2]PF06444NADH dehydrogenase subunit 2 C-terminus (NADH_dehy_S2_C)NADH dehydrogenase subunit 2 C-terminusThis family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with Pfam:PF00361. Domain
W [auth D4]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
W [auth D4]PF01059NADH-ubiquinone oxidoreductase chain 4, amino terminus (Oxidored_q5_N)NADH-ubiquinone oxidoreductase chain 4, amino terminusThis domain is found at the N-terminal end of NADH-ubiquinone oxidoreductase chain 4 and similar sequences from bacteria and eukaryotes. This domain is found upstream of Pfam:PF00361 and shows an all-alpha structure. Domain
V [auth D5]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
V [auth D5]PF06455NADH dehydrogenase subunit 5 C-terminus (NADH5_C)NADH dehydrogenase subunit 5 C-terminusThis entry represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with Pfam:PF00361 and Pfam:PF00662. Domain
V [auth D5]PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminusThis entry represents an amino terminal extension of Pfam:PF00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in ...This entry represents an amino terminal extension of Pfam:PF00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Domain
U [auth 4L]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
T [auth D6]PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
S [auth D1]PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family
R [auth D3]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth S6]NDUFS6---
H [auth V3]NDUFV3---
G [auth S8]NDUFS8---
F [auth S7]NDUFS7---
E [auth S3]NADH:ubiquinone oxidoreductase core subunit S3---
SA [auth A1]NDUFA1---
RA [auth B1]NDUFB1---
QA [auth C1]NDUFC1---
PA [auth BK]NDUFB11---
OA [auth B8]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial---
D [auth S2]NDUFS2---
NA [auth B2]NADH:ubiquinone oxidoreductase subunit B2---
MA [auth B9]NADH:ubiquinone oxidoreductase subunit B9---
LA [auth B7]NADH:ubiquinone oxidoreductase subunit B7---
KA [auth B6]NDUFB6---
JA [auth AM]NDUFA13---
IA [auth B4]NADH:ubiquinone oxidoreductase subunit B4---
HA [auth C2]NADH dehydrogenase [ubiquinone] 1 subunit C2---
GA [auth B3]NADH:ubiquinone oxidoreductase subunit B3---
FA [auth A3]NADH:ubiquinone oxidoreductase subunit A3---
EA [auth S5]NADH:ubiquinone oxidoreductase subunit S5---
C [auth S1]NADH:ubiquinone oxidoreductase core subunit S1---
DA [auth AJ]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial---
CA [auth BJ]NDUFB10---
BA [auth A8]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8---
Z [auth B5]NADH:ubiquinone oxidoreductase subunit B5---
Y [auth AK]NDUFA11---
X [auth D2]NADH-ubiquinone oxidoreductase chain 2
W [auth D4]NADH-ubiquinone oxidoreductase chain 4
V [auth D5]NADH-ubiquinone oxidoreductase chain 5
U [auth 4L]NADH-ubiquinone oxidoreductase chain 4L
T [auth D6]NADH-ubiquinone oxidoreductase chain 6
B [auth V2]NDUFV2---
S [auth D1]NADH-ubiquinone oxidoreductase chain 1
R [auth D3]NADH-ubiquinone oxidoreductase chain 3
AA [auth AB],
Q [auth AA]
Acyl carrier protein---
P [auth AL]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12---
O [auth A7]NDUFA7---
N [auth A6]NADH:ubiquinone oxidoreductase subunit A6---
M [auth A5]NDUFA5---
L [auth A2]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2---
K [auth A9]NADH:ubiquinone oxidoreductase subunit A9---
J [auth S4]NADH:ubiquinone oxidoreductase subunit S4---
A [auth V1]NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
X [auth D2]IPR010933NADH dehydrogenase subunit 2, C-terminalDomain
X [auth D2]IPR003917NADH:ubiquinone oxidoreductase, chain 2Family
X [auth D2]IPR050175Complex I Subunit 2Family
X [auth D2]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
W [auth D4]IPR003918NADH:ubiquinone oxidoreductaseFamily
W [auth D4]IPR010227NADH-quinone oxidoreductase, chain M/4Family
W [auth D4]IPR000260NADH:ubiquinone oxidoreductase chain 4, N-terminalDomain
W [auth D4]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
V [auth D5]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
V [auth D5]IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
V [auth D5]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
V [auth D5]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
V [auth D5]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
U [auth 4L]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
U [auth 4L]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
T [auth D6]IPR050269Complex I Subunit 6Family
T [auth D6]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
T [auth D6]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
S [auth D1]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
S [auth D1]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
R [auth D3]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
R [auth D3]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily