6Q14

Structure of the Salmonella SPI-1 injectisome NC-base


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth AA]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
A [auth AA]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
BB [auth w]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
BB [auth w]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
EA [auth AL]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
EA [auth AL]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
EB [auth z]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
EB [auth z]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
R [auth AH]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
R [auth AH]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
S [auth AI]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
S [auth AI]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
UA [auth p]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
UA [auth p]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
VA [auth q]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
VA [auth q]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
XA [auth s]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
XA [auth s]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
YA [auth t]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
YA [auth t]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
ZA [auth u]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
ZA [auth u]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
AB [auth v]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
AB [auth v]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
CB [auth x]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
CB [auth x]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
DB [auth y]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
DB [auth y]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
F [auth AF]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
F [auth AF]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
FB [auth AJ]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
FB [auth AJ]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
GB [auth AK]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
GB [auth AK]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
WA [auth r]SCOP2B SuperfamilyBON domain-like8092191 3002566 SCOP2B (2022-06-29)
WA [auth r]SCOP2B SuperfamilyNRho-like8092192 3002569 SCOP2B (2022-06-29)
KB [auth D]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
KB [auth D]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
LB [auth F]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
LB [auth F]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
MB [auth G]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
MB [auth G]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
NB [auth H]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
NB [auth H]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
OB [auth I]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
OB [auth I]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
PB [auth J]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
PB [auth J]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
QB [auth K]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
QB [auth K]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
TB [auth N]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
TB [auth N]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
VB [auth P]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
VB [auth P]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
HB [auth A]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
HB [auth A]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
IB [auth B]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
IB [auth B]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
JB [auth C]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
JB [auth C]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
RB [auth L]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
RB [auth L]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
SB [auth M]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
SB [auth M]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
U [auth Q]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
U [auth Q]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)
UB [auth O]SCOP2B SuperfamilySTN domain-like8057266 3002388 SCOP2B (2022-06-29)
UB [auth O]SCOP2B SuperfamilySecretin repeat domain-like8057265 3002387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AA]PF01514e6q14AA1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
A [auth AA]F_UNCLASSIFIEDe6q14AA2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
B [auth AB]PF01514e6q14AB1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
B [auth AB]F_UNCLASSIFIEDe6q14AB2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
BB [auth w]PF01514e6q14w2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
BB [auth w]F_UNCLASSIFIEDe6q14w1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
C [auth AC]PF01514e6q14AC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
C [auth AC]F_UNCLASSIFIEDe6q14AC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
D [auth AD]PF01514e6q14AD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
D [auth AD]F_UNCLASSIFIEDe6q14AD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
E [auth AE]PF01514e6q14AE1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
E [auth AE]F_UNCLASSIFIEDe6q14AE2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
EA [auth AL]PF01514e6q14AL1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
EA [auth AL]F_UNCLASSIFIEDe6q14AL2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
EB [auth z]PF01514e6q14z2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
EB [auth z]F_UNCLASSIFIEDe6q14z1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
G [auth AG]PF01514e6q14AG1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
G [auth AG]F_UNCLASSIFIEDe6q14AG2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
R [auth AH]PF01514e6q14AH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
R [auth AH]F_UNCLASSIFIEDe6q14AH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
S [auth AI]PF01514e6q14AI1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
S [auth AI]F_UNCLASSIFIEDe6q14AI2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
TA [auth o]PF01514e6q14o2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
TA [auth o]F_UNCLASSIFIEDe6q14o1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
UA [auth p]PF01514e6q14p2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
UA [auth p]F_UNCLASSIFIEDe6q14p1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
VA [auth q]PF01514e6q14q1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
VA [auth q]F_UNCLASSIFIEDe6q14q2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
XA [auth s]PF01514e6q14s1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
XA [auth s]F_UNCLASSIFIEDe6q14s2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
YA [auth t]PF01514e6q14t1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
YA [auth t]F_UNCLASSIFIEDe6q14t2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
ZA [auth u]PF01514e6q14u2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
ZA [auth u]F_UNCLASSIFIEDe6q14u1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
AB [auth v]PF01514e6q14v1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
AB [auth v]F_UNCLASSIFIEDe6q14v2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
CB [auth x]PF01514e6q14x1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
CB [auth x]F_UNCLASSIFIEDe6q14x2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
DB [auth y]PF01514e6q14y1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
DB [auth y]F_UNCLASSIFIEDe6q14y2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
F [auth AF]PF01514e6q14AF1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
F [auth AF]F_UNCLASSIFIEDe6q14AF2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
FB [auth AJ]PF01514e6q14AJ1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
FB [auth AJ]F_UNCLASSIFIEDe6q14AJ2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
GB [auth AK]PF01514e6q14AK1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
GB [auth AK]F_UNCLASSIFIEDe6q14AK2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
WA [auth r]PF01514e6q14r1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF01514ECOD (1.6)
WA [auth r]F_UNCLASSIFIEDe6q14r2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: F_UNCLASSIFIEDECOD (1.6)
AA [auth W]PF09480e6q14W2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
BA [auth X]PF09480e6q14X3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
CA [auth Y]PF09480e6q14Y2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
DA [auth Z]PF09480e6q14Z1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
GA [auth b]PF09480e6q14b2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
IA [auth d]PF09480e6q14d1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
JA [auth e]PF09480e6q14e3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
LA [auth g]PF09480e6q14g1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
NA [auth i]PF09480e6q14i1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
OA [auth j]PF09480e6q14j1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
PA [auth k]PF09480e6q14k3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
QA [auth l]PF09480e6q14l3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
V [auth R]PF09480e6q14R3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
W [auth S]PF09480e6q14S2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
X [auth T]PF09480e6q14T2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
Y [auth U]PF09480e6q14U2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
Z [auth V]PF09480e6q14V3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
FA [auth a]PF09480e6q14a1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
HA [auth c]PF09480e6q14c1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
KA [auth f]PF09480e6q14f3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
MA [auth h]PF09480e6q14h2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
RA [auth m]PF09480e6q14m3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
SA [auth n]PF09480e6q14n2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
T [auth E]PF09480e6q14E1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif I in type III secretion system (From Topology)T: Ring-building motif I in type III secretion systemF: PF09480ECOD (1.6)
KB [auth D]PF00263e6q14D3 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
KB [auth D]PF03958e6q14D2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
KB [auth D]PF03958,PF21304e6q14D1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
LB [auth F]PF00263e6q14F3 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
LB [auth F]PF03958e6q14F2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
LB [auth F]PF03958,PF21304e6q14F1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
MB [auth G]PF00263e6q14G2 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
MB [auth G]PF03958e6q14G1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
MB [auth G]PF03958,PF21304e6q14G3 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
NB [auth H]PF00263e6q14H3 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
NB [auth H]PF03958e6q14H1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
NB [auth H]PF03958,PF21304e6q14H2 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
OB [auth I]PF00263e6q14I1 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
OB [auth I]PF03958e6q14I2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
OB [auth I]PF03958,PF21304e6q14I3 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
PB [auth J]PF00263e6q14J1 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
PB [auth J]PF03958e6q14J2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
PB [auth J]PF03958,PF21304e6q14J3 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
QB [auth K]PF00263e6q14K1 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
QB [auth K]PF03958e6q14K2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
QB [auth K]PF03958,PF21304e6q14K3 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
TB [auth N]PF00263e6q14N2 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
TB [auth N]PF03958e6q14N3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
TB [auth N]PF03958,PF21304e6q14N1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
VB [auth P]PF00263e6q14P2 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
VB [auth P]PF03958e6q14P1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
VB [auth P]PF03958,PF21304e6q14P3 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
HB [auth A]PF00263e6q14A2 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
HB [auth A]PF03958e6q14A3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
HB [auth A]PF03958,PF21304e6q14A1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
IB [auth B]PF00263e6q14B1 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
IB [auth B]PF03958e6q14B2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
IB [auth B]PF03958,PF21304e6q14B3 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
JB [auth C]PF00263e6q14C3 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
JB [auth C]PF03958e6q14C2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
JB [auth C]PF03958,PF21304e6q14C1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
RB [auth L]PF00263e6q14L3 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
RB [auth L]PF03958e6q14L2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
RB [auth L]PF03958,PF21304e6q14L1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
SB [auth M]PF00263e6q14M2 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
SB [auth M]PF03958e6q14M3 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
SB [auth M]PF03958,PF21304e6q14M1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)
U [auth Q]PF03958e6q14Q2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
U [auth Q]PF21304e6q14Q1 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF21304ECOD (1.6)
UB [auth O]PF00263e6q14O3 A: beta barrelsX: secretin domain (From Topology)H: secretin domain (From Topology)T: secretin domainF: PF00263ECOD (1.6)
UB [auth O]PF03958e6q14O1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: PF03958ECOD (1.6)
UB [auth O]PF03958,PF21304e6q14O2 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: N0 domain in phage tail proteins and secretins (From Topology)T: N0 domain in phage tail proteins and secretinsF: PF03958,PF21304ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01514Secretory protein of YscJ/FliF family (YscJ_FliF)Secretory protein of YscJ/FliF family- Family
H [auth 0],
I [auth 1],
J [auth 2],
K [auth 3],
L [auth 4]
PF00813FliP family (FliP)FliP family- Family
M [auth 5]PF01311Bacterial export proteins, family 1 (Bac_export_1)Bacterial export proteins, family 1- Family
N [auth 6],
O [auth 7],
P [auth 8],
Q [auth 9]
PF01313Bacterial export proteins, family 3 (Bac_export_3)Bacterial export proteins, family 3- Family
PF09480Type III secretion system protein PrgH-EprH (PrgH) (PrgH)Type III secretion system protein PrgH-EprH (PrgH)- Family
PF03958Bacterial type II/III secretion system short domain (Secretin_N)Bacterial type II/III secretion system short domainThis is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.Domain
PF00263Bacterial type II and III secretion system protein (Secretin)Bacterial type II and III secretion system protein- Family
PF21304SPI-1 type 3 secretion system secretin, N0 domain (T3S_SPI-1_N0)SPI-1 type 3 secretion system secretin, N0 domainSPI-1 type 3 secretion system secretin forms a ring-shaped multimeric structure which is used to inject bacterial effector proteins into eukaryotic host cells [1-3]. It consists of several N-terminal short domains and a C-terminal secretin domain (P ...SPI-1 type 3 secretion system secretin forms a ring-shaped multimeric structure which is used to inject bacterial effector proteins into eukaryotic host cells [1-3]. It consists of several N-terminal short domains and a C-terminal secretin domain (Pfam:PF00263). This entry represents the N-terminal N0 domain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Lipoprotein PrgK-
H [auth 0],
I [auth 1],
J [auth 2],
K [auth 3],
L [auth 4]
Surface presentation of antigens protein SpaP-
M [auth 5]Surface presentation of antigens protein SpaR-
N [auth 6],
O [auth 7],
P [auth 8],
Q [auth 9]
Surface presentation of antigens protein SpaQ-
Protein PrgH- -
Protein InvG

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR045851AMP-binding enzyme, C-terminal domain superfamilyHomologous Superfamily
IPR003282Type III secretion system lipoprotein HrcJ/YscJFamily
IPR006182Flagellar M-ring , N-terminalDomain
IPR043427Lipoprotein YscJ/Flagellar M-ring proteinFamily
H [auth 0],
I [auth 1],
J [auth 2],
K [auth 3],
L [auth 4]
IPR005838Type III secretion system inner membrane P proteinFamily
H [auth 0],
I [auth 1],
J [auth 2],
K [auth 3],
L [auth 4]
IPR005773Type III secretion system, Yop virulence translocation protein R-likeFamily
M [auth 5]IPR002010Type III secretion system inner membrane R proteinFamily
M [auth 5]IPR006304Type III secretion protein SpaR/YscTFamily
N [auth 6],
O [auth 7],
P [auth 8],
Q [auth 9]
IPR006306Type III secretion protein HrpOFamily
N [auth 6],
O [auth 7],
P [auth 8],
Q [auth 9]
IPR002191Bacterial export protein family 3Family
IPR019029Type III secretion system, PrgH/EprH-likeFamily
IPR013387Type III secretion system, PrgH/EprHFamily
IPR005644NolW-likeDomain
IPR004846Type II/III secretion system, secretin-like domainDomain
IPR038591NolW-like superfamilyHomologous Superfamily
IPR003522Type III secretion system outer membrane pore YscC/HrcCFamily
IPR004845Type II secretion system protein GspD, conserved siteConserved Site
IPR049034SPI-1 type 3 secretion system secretin, N0 domainDomain