6PTN

Structure of Ctf4 trimer in complex with two CMG helicases


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth E]PF12341e6ptnE2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: PF12341ECOD (1.6)
A [auth E]PF20946e6ptnE1 A: alpha superhelicesX: Repetitive alpha hairpinsH: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)T: DNA polymerase alpha-binding protein Ctf4 C-terminal domainF: PF20946ECOD (1.6)
B [auth F]PF12341e6ptnF1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: PF12341ECOD (1.6)
B [auth F]PF20946e6ptnF2 A: alpha superhelicesX: Repetitive alpha hairpinsH: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)T: DNA polymerase alpha-binding protein Ctf4 C-terminal domainF: PF20946ECOD (1.6)
C [auth G]PF12341e6ptnG2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: PF12341ECOD (1.6)
C [auth G]PF20946e6ptnG1 A: alpha superhelicesX: Repetitive alpha hairpinsH: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)T: DNA polymerase alpha-binding protein Ctf4 C-terminal domainF: PF20946ECOD (1.6)
L [auth l]PF17207e6ptnl5 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
L [auth l]PF17855e6ptnl2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
L [auth l]PF14551e6ptnl3 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
L [auth l]PF00493e6ptnl1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
L [auth l]F_UNCLASSIFIEDe6ptnl4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
W [auth 5]PF17207e6ptn53 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
W [auth 5]PF17855e6ptn55 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
W [auth 5]PF14551e6ptn52 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
W [auth 5]PF00493e6ptn51 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
W [auth 5]F_UNCLASSIFIEDe6ptn54 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
M [auth m]PF17207e6ptnm2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
M [auth m]PF17855e6ptnm4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
M [auth m]PF14551e6ptnm5 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
M [auth m]PF00493e6ptnm3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
M [auth m]PF17207e6ptnm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
X [auth 6]PF17207e6ptn61 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
X [auth 6]PF17855e6ptn64 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
X [auth 6]PF14551e6ptn63 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
X [auth 6]PF00493e6ptn62 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
X [auth 6]PF17207e6ptn65 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
N [auth n]PF17207e6ptnn1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
N [auth n]PF17855e6ptnn3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
N [auth n]PF14551e6ptnn5 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
N [auth n]PF00493e6ptnn4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
N [auth n]F_UNCLASSIFIEDe6ptnn2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
Y [auth 7]PF17207e6ptn75 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
Y [auth 7]PF17855e6ptn72 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
Y [auth 7]PF14551e6ptn74 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
Y [auth 7]PF00493e6ptn73 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
Y [auth 7]F_UNCLASSIFIEDe6ptn71 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
D [auth a]PF05916e6ptna1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
D [auth a]F_UNCLASSIFIEDe6ptna2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
O [auth A]PF05916e6ptnA1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
O [auth A]F_UNCLASSIFIEDe6ptnA2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
E [auth b]PF05916e6ptnb1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
E [auth b]F_UNCLASSIFIEDe6ptnb2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
P [auth B]PF05916e6ptnB1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
P [auth B]F_UNCLASSIFIEDe6ptnB2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
F [auth c]PF05916e6ptnc2 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
F [auth c]PF22466e6ptnc1 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
Q [auth C]PF05916e6ptnC1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
Q [auth C]PF22466e6ptnC2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
G [auth d]PF05916e6ptnd1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
G [auth d]PF16922e6ptnd2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
R [auth D]PF05916e6ptnD1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
R [auth D]PF16922e6ptnD2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
H [auth h]PF02724e6ptnh2 A: alpha arraysX: HhH/H2THH: Cdc45 CID domain (From Topology)T: Cdc45 CID domainF: PF02724ECOD (1.6)
H [auth h]PF02724e6ptnh3 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: PF02724ECOD (1.6)
H [auth h]PF02724e6ptnh1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: PF02724ECOD (1.6)
S [auth H]PF02724e6ptnH2 A: alpha arraysX: HhH/H2THH: Cdc45 CID domain (From Topology)T: Cdc45 CID domainF: PF02724ECOD (1.6)
S [auth H]PF02724e6ptnH1 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: PF02724ECOD (1.6)
S [auth H]PF02724e6ptnH3 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: PF02724ECOD (1.6)
I [auth i]PF17207e6ptni4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
I [auth i]PF17855e6ptni2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
I [auth i]PF14551e6ptni1 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
I [auth i]PF00493e6ptni3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
I [auth i]F_UNCLASSIFIEDe6ptni5 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
T [auth 2]PF17207e6ptn24 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
T [auth 2]PF17855e6ptn22 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
T [auth 2]PF14551e6ptn21 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
T [auth 2]PF00493e6ptn23 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
T [auth 2]F_UNCLASSIFIEDe6ptn25 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
J [auth j]PF17207e6ptnj4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
J [auth j]PF17855e6ptnj3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
J [auth j]PF14551e6ptnj5 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
J [auth j]PF00493e6ptnj1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
J [auth j]F_UNCLASSIFIEDe6ptnj2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
U [auth 3]PF17207e6ptn33 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
U [auth 3]PF17855e6ptn34 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
U [auth 3]PF14551e6ptn32 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
U [auth 3]PF00493e6ptn35 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
U [auth 3]F_UNCLASSIFIEDe6ptn31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
K [auth k]PF17207e6ptnk5 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
K [auth k]PF17855e6ptnk1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
K [auth k]PF21128e6ptnk4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF21128ECOD (1.6)
K [auth k]PF14551e6ptnk3 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
K [auth k]PF00493e6ptnk6 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
K [auth k]PF17207e6ptnk2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
V [auth 4]PF17207e6ptn44 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
V [auth 4]PF17855e6ptn46 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
V [auth 4]PF21128e6ptn42 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF21128ECOD (1.6)
V [auth 4]PF14551e6ptn41 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
V [auth 4]PF00493e6ptn43 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
V [auth 4]PF17207e6ptn45 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth E],
B [auth F],
C [auth G]
PF12341Minichromosome loss protein, Mcl1, middle region (Mcl1_mid)Minichromosome loss protein, Mcl1, middle region- Repeat
A [auth E],
B [auth F],
C [auth G]
PF20946DNA polymerase alpha-binding protein Ctf4, C-terminal domain (Ctf4_C)DNA polymerase alpha-binding protein Ctf4, C-terminal domainThis domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the ...This domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the genome in vivo. This domain folds into a helical extension that is linked to the beta-propeller domain (Pfam:PF12341) and protrudes from one face of the disk-shaped trimer formed by the protein. It is essential for binding of dynamic partner proteins, such as Pol alpha-primase [1-4].
Domain
L [auth l],
W [auth 5]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
L [auth l],
W [auth 5]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
L [auth l],
W [auth 5]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
M [auth m],
X [auth 6]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
M [auth m],
X [auth 6]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
M [auth m],
X [auth 6]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
M [auth m],
X [auth 6]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
N [auth n],
Y [auth 7]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
N [auth n],
Y [auth 7]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
N [auth n],
Y [auth 7]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
N [auth n],
Y [auth 7]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
D [auth a],
O [auth A]
PF05916GINS complex protein (Sld5)GINS complex protein- Family
E [auth b],
P [auth B]
PF05916GINS complex protein (Sld5)GINS complex protein- Family
F [auth c],
Q [auth C]
PF05916GINS complex protein (Sld5)GINS complex protein- Family
G [auth d],
R [auth D]
PF05916GINS complex protein (Sld5)GINS complex protein- Family
G [auth d],
R [auth D]
PF16922DNA replication complex GINS protein SLD5 C-terminus (SLD5_C)DNA replication complex GINS protein SLD5 C-terminusThe C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1].Domain
H [auth h],
S [auth H]
PF02724CDC45-like protein (CDC45)CDC45-like protein- Family
I [auth i],
T [auth 2]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
I [auth i],
T [auth 2]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
I [auth i],
T [auth 2]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
I [auth i],
T [auth 2]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
J [auth j],
U [auth 3]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
J [auth j],
U [auth 3]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
J [auth j],
U [auth 3]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
J [auth j],
U [auth 3]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
K [auth k],
V [auth 4]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
K [auth k],
V [auth 4]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
K [auth k],
V [auth 4]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
K [auth k],
V [auth 4]
PF21128MCM4, winged helix domain (MCM4_WHD)MCM4, winged helix domainDNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elon ...DNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells [1-3]. This is the winged helix domain (WHD) found at the C-terminal of MCM4 [1-3]. Upon ssDNA binding the MCM5-WHD moves out of the central channel and becomes disordered, the MCM6-WHD moves backward and away from the channel, and the MCM4-WHD now partially occludes the channel opening. These changes enable CMG (Cdc45, Mcm2-7, GINS, the eukaryotic replicative helicase) to encircle dsDNA, and is consistent with reports that showed the MCM2-7 matures into two fully assembled CMGs on dsDNA before origin DNA unwinding occurs [3].
Domain
K [auth k],
V [auth 4]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth E],
B [auth F],
C [auth G]
DNA polymerase alpha-binding protein
L [auth l],
W [auth 5]
Minichromosome maintenance protein 5
M [auth m],
X [auth 6]
DNA replication licensing factor MCM6
N [auth n],
Y [auth 7]
DNA replication licensing factor MCM7
D [auth a],
O [auth A]
DNA replication complex GINS protein PSF1-
E [auth b],
P [auth B]
DNA replication complex GINS protein PSF2-
F [auth c],
Q [auth C]
DNA replication complex GINS protein PSF3-
G [auth d],
R [auth D]
DNA replication complex GINS protein SLD5-
H [auth h],
S [auth H]
Cell division control protein 45
I [auth i],
T [auth 2]
DNA replication licensing factor MCM2
J [auth j],
U [auth 3]
DNA replication licensing factor MCM3
K [auth k],
V [auth 4]
DNA replication licensing factor MCM4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth E],
B [auth F],
C [auth G]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A [auth E],
B [auth F],
C [auth G]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A [auth E],
B [auth F],
C [auth G]
IPR022100Minichromosome loss protein Mcl1, middle regionDomain
A [auth E],
B [auth F],
C [auth G]
IPR048591DNA polymerase alpha-binding protein Ctf4-like, C-terminal domainDomain
L [auth l],
W [auth 5]
IPR031327Mini-chromosome maintenance proteinFamily
L [auth l],
W [auth 5]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
L [auth l],
W [auth 5]
IPR001208MCM domainDomain
L [auth l],
W [auth 5]
IPR041562MCM, AAA-lid domainDomain
L [auth l],
W [auth 5]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
L [auth l],
W [auth 5]
IPR027925MCM, N-terminal domainDomain
L [auth l],
W [auth 5]
IPR033762MCM OB domainDomain
L [auth l],
W [auth 5]
IPR008048DNA replication licensing factor Mcm5Family
L [auth l],
W [auth 5]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth m],
X [auth 6]
IPR008049DNA replication licensing factor Mcm6Family
M [auth m],
X [auth 6]
IPR041024Mcm6, C-terminal winged-helix domainDomain
M [auth m],
X [auth 6]
IPR031327Mini-chromosome maintenance proteinFamily
M [auth m],
X [auth 6]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
M [auth m],
X [auth 6]
IPR001208MCM domainDomain
M [auth m],
X [auth 6]
IPR041562MCM, AAA-lid domainDomain
M [auth m],
X [auth 6]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
M [auth m],
X [auth 6]
IPR027925MCM, N-terminal domainDomain
M [auth m],
X [auth 6]
IPR033762MCM OB domainDomain
M [auth m],
X [auth 6]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth n],
Y [auth 7]
IPR031327Mini-chromosome maintenance proteinFamily
N [auth n],
Y [auth 7]
IPR008050DNA replication licensing factor Mcm7Family
N [auth n],
Y [auth 7]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
N [auth n],
Y [auth 7]
IPR003593AAA+ ATPase domainDomain
N [auth n],
Y [auth 7]
IPR001208MCM domainDomain
N [auth n],
Y [auth 7]
IPR041562MCM, AAA-lid domainDomain
N [auth n],
Y [auth 7]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
N [auth n],
Y [auth 7]
IPR027925MCM, N-terminal domainDomain
N [auth n],
Y [auth 7]
IPR033762MCM OB domainDomain
N [auth n],
Y [auth 7]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth a],
O [auth A]
IPR005339GINS complex, subunit Psf1Family
D [auth a],
O [auth A]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
D [auth a],
O [auth A]
IPR021151GINS subunit, domain ADomain
E [auth b],
P [auth B]
IPR007257DNA replication complex GINS protein Psf2Family
E [auth b],
P [auth B]
IPR021151GINS subunit, domain ADomain
E [auth b],
P [auth B]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
F [auth c],
Q [auth C]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
F [auth c],
Q [auth C]
IPR021151GINS subunit, domain ADomain
F [auth c],
Q [auth C]
IPR010492GINS complex, subunit Psf3Family
F [auth c],
Q [auth C]
IPR038437GINS complex, subunit Psf3 superfamilyHomologous Superfamily
G [auth d],
R [auth D]
IPR008591GINS complex subunit Sld5Family
G [auth d],
R [auth D]
IPR038749GINS complex protein Sld5, alpha-helical domainDomain
G [auth d],
R [auth D]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
G [auth d],
R [auth D]
IPR021151GINS subunit, domain ADomain
G [auth d],
R [auth D]
IPR031633DNA replication complex GINS protein SLD5, C-terminalDomain
H [auth h],
S [auth H]
IPR003874CDC45 familyFamily
I [auth i],
T [auth 2]
IPR031327Mini-chromosome maintenance proteinFamily
I [auth i],
T [auth 2]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
I [auth i],
T [auth 2]
IPR001208MCM domainDomain
I [auth i],
T [auth 2]
IPR041562MCM, AAA-lid domainDomain
I [auth i],
T [auth 2]
IPR008045DNA replication licensing factor Mcm2Family
I [auth i],
T [auth 2]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
I [auth i],
T [auth 2]
IPR027925MCM, N-terminal domainDomain
I [auth i],
T [auth 2]
IPR033762MCM OB domainDomain
I [auth i],
T [auth 2]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth j],
U [auth 3]
IPR031327Mini-chromosome maintenance proteinFamily
J [auth j],
U [auth 3]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
J [auth j],
U [auth 3]
IPR003593AAA+ ATPase domainDomain
J [auth j],
U [auth 3]
IPR001208MCM domainDomain
J [auth j],
U [auth 3]
IPR041562MCM, AAA-lid domainDomain
J [auth j],
U [auth 3]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
J [auth j],
U [auth 3]
IPR027925MCM, N-terminal domainDomain
J [auth j],
U [auth 3]
IPR008046DNA replication licensing factor Mcm3Family
J [auth j],
U [auth 3]
IPR033762MCM OB domainDomain
J [auth j],
U [auth 3]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth k],
V [auth 4]
IPR031327Mini-chromosome maintenance proteinFamily
K [auth k],
V [auth 4]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
K [auth k],
V [auth 4]
IPR001208MCM domainDomain
K [auth k],
V [auth 4]
IPR041562MCM, AAA-lid domainDomain
K [auth k],
V [auth 4]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth k],
V [auth 4]
IPR027925MCM, N-terminal domainDomain
K [auth k],
V [auth 4]
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
K [auth k],
V [auth 4]
IPR008047Mini-chromosome maintenance complex protein 4Family
K [auth k],
V [auth 4]
IPR033762MCM OB domainDomain
K [auth k],
V [auth 4]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily