6PTG | pdb_00006ptg

Structure of RNA polymerase binding protein and transcriptional regulator Dks from Chlamydia trachomatis L2 (LGV434)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	UNK_F_TYPE	e6ptgB1	A: alpha bundles	X: Long alpha-hairpin	H: DnaK suppressor protein DksA, alpha-hairpin domain (From Topology)	T: DnaK suppressor protein DksA, alpha-hairpin domain	F: UNK_F_TYPE	ECOD (1.6)
B	UNK_F_TYPE	e6ptgB2	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e6ptgA1	A: alpha bundles	X: Long alpha-hairpin	H: DnaK suppressor protein DksA, alpha-hairpin domain (From Topology)	T: DnaK suppressor protein DksA, alpha-hairpin domain	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e6ptgA2	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: UNK_F_TYPE	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01258	Prokaryotic dksA/traR C4-type zinc finger (zf-dskA_traR)	Prokaryotic dksA/traR C4-type zinc finger	This domain is found in the members of the DksA/TraR family. It adopts a treble clef fold [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	DnaK Suppressor	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR037187	DksA, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR000962	Zinc finger, DksA/TraR C4-type	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.