6PEM | pdb_00006pem

Focussed refinement of InvGN0N1:SpaPQR:PrgHK from Salmonella SPI-1 injectisome NC-base

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
AA [auth H]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
AA [auth H]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
BA [auth I]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
BA [auth I]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
CA [auth J]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
CA [auth J]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
DA [auth K]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
DA [auth K]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
EA [auth L]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
EA [auth L]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
FA [auth M]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
FA [auth M]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
GA [auth N]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
GA [auth N]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
HA [auth O]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
HA [auth O]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
IA [auth P]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
IA [auth P]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
JA [auth Q]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
JA [auth Q]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
T [auth A]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
T [auth A]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
U [auth B]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
U [auth B]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
V [auth C]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
V [auth C]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
W [auth D]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
W [auth D]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
Y [auth F]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
Y [auth F]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
Z [auth G]	SCOP2B Superfamily	Secretin repeat domain-like	8057265	3002387	SCOP2B (2022-06-29)
Z [auth G]	SCOP2B Superfamily	STN domain-like	8057266	3002388	SCOP2B (2022-06-29)
VB [auth AK]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
VB [auth AK]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
UB [auth AJ]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
UB [auth AJ]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
TB [auth z]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
TB [auth z]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
TA [auth AL]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
TA [auth AL]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
SB [auth y]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
SB [auth y]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
S [auth AI]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
S [auth AI]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
RB [auth x]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
RB [auth x]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
R [auth AH]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
R [auth AH]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
QB [auth w]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
QB [auth w]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
PB [auth v]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
PB [auth v]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
OB [auth u]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
OB [auth u]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
NB [auth t]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
NB [auth t]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
MB [auth s]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
MB [auth s]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
LB [auth r]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
LB [auth r]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
KB [auth q]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
KB [auth q]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
JB [auth p]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
JB [auth p]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
IB [auth o]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
IB [auth o]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
G [auth AG]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
G [auth AG]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
F [auth AF]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
F [auth AF]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
E [auth AE]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
E [auth AE]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
D [auth AD]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
D [auth AD]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
C [auth AC]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
C [auth AC]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
B [auth AB]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
B [auth AB]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)
A [auth AA]	SCOP2B Superfamily	NRho-like	8092192	3002569	SCOP2B (2022-06-29)
A [auth AA]	SCOP2B Superfamily	BON domain-like	8092191	3002566	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
AA [auth H]	T3SS_needle_F	e6pemH1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
BA [auth I]	T3SS_needle_F	e6pemI1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
CA [auth J]	T3SS_needle_F	e6pemJ1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
DA [auth K]	T3SS_needle_F	e6pemK1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
EA [auth L]	T3SS_needle_F	e6pemL1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
FA [auth M]	T3SS_needle_F	e6pemM1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
GA [auth N]	T3SS_needle_F	e6pemN1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
HA [auth O]	T3SS_needle_F	e6pemO1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
IA [auth P]	T3SS_needle_F	e6pemP1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
JA [auth Q]	T3SS_needle_F	e6pemQ1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
T [auth A]	T3SS_needle_F	e6pemA1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
U [auth B]	T3SS_needle_F	e6pemB1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
V [auth C]	T3SS_needle_F	e6pemC1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
W [auth D]	T3SS_needle_F	e6pemD1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
Y [auth F]	T3SS_needle_F	e6pemF1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
Z [auth G]	T3SS_needle_F	e6pemG1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
ZA [auth f]	T3SS_needle_F	e6pemf1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
YA [auth e]	T3SS_needle_F	e6peme1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
XA [auth d]	T3SS_needle_F	e6pemd1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
X [auth E]	T3SS_needle_F	e6pemE1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
WA [auth c]	T3SS_needle_F	e6pemc1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
VA [auth b]	T3SS_needle_F	e6pemb1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
UA [auth a]	T3SS_needle_F	e6pema1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
SA [auth Z]	T3SS_needle_F	e6pemZ1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
RA [auth Y]	T3SS_needle_F	e6pemY1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
QA [auth X]	T3SS_needle_F	e6pemX1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
PA [auth W]	T3SS_needle_F	e6pemW1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
OA [auth V]	T3SS_needle_F	e6pemV1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
NA [auth U]	T3SS_needle_F	e6pemU1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
MA [auth T]	T3SS_needle_F	e6pemT1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
LA [auth S]	T3SS_needle_F	e6pemS1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
KA [auth R]	T3SS_needle_F	e6pemR1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
HB [auth n]	T3SS_needle_F	e6pemn1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
GB [auth m]	T3SS_needle_F	e6pemm1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
FB [auth l]	T3SS_needle_F	e6peml1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
EB [auth k]	T3SS_needle_F	e6pemk1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
DB [auth j]	T3SS_needle_F	e6pemj1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
CB [auth i]	T3SS_needle_F	e6pemi1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
BB [auth h]	T3SS_needle_F	e6pemh1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
AB [auth g]	T3SS_needle_F	e6pemg1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
VB [auth AK]	T3SS_needle_F	e6pemAK1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
UB [auth AJ]	T3SS_needle_F	e6pemAJ1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
TB [auth z]	T3SS_needle_F	e6pemz1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
TA [auth AL]	T3SS_needle_F	e6pemAL1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
SB [auth y]	T3SS_needle_F	e6pemy1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
S [auth AI]	T3SS_needle_F	e6pemAI1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
RB [auth x]	T3SS_needle_F	e6pemx1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
R [auth AH]	T3SS_needle_F	e6pemAH1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
QB [auth w]	T3SS_needle_F	e6pemw1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
PB [auth v]	T3SS_needle_F	e6pemv1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
OB [auth u]	T3SS_needle_F	e6pemu1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
NB [auth t]	T3SS_needle_F	e6pemt1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
MB [auth s]	T3SS_needle_F	e6pems1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
LB [auth r]	T3SS_needle_F	e6pemr1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
KB [auth q]	T3SS_needle_F	e6pemq1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
JB [auth p]	T3SS_needle_F	e6pemp1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
IB [auth o]	T3SS_needle_F	e6pemo1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
G [auth AG]	T3SS_needle_F	e6pemAG1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
F [auth AF]	T3SS_needle_F	e6pemAF1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
E [auth AE]	T3SS_needle_F	e6pemAE1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
D [auth AD]	T3SS_needle_F	e6pemAD1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
C [auth AC]	T3SS_needle_F	e6pemAC1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
B [auth AB]	T3SS_needle_F	e6pemAB1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)
A [auth AA]	T3SS_needle_F	e6pemAA1	A: alpha bundles	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: T3SS_needle_F	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	PF03958	Bacterial type II/III secretion system short domain (Secretin_N)	Bacterial type II/III secretion system short domain	This is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.	Domain
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	PF21304	SPI-1 type 3 secretion system secretin, N0 domain (T3S_SPI-1_N0)	SPI-1 type 3 secretion system secretin, N0 domain	SPI-1 type 3 secretion system secretin forms a ring-shaped multimeric structure which is used to inject bacterial effector proteins into eukaryotic host cells [1-3]. It consists of several N-terminal short domains and a C-terminal secretin domain (P ...	SPI-1 type 3 secretion system secretin forms a ring-shaped multimeric structure which is used to inject bacterial effector proteins into eukaryotic host cells [1-3]. It consists of several N-terminal short domains and a C-terminal secretin domain (Pfam:PF00263). This entry represents the N-terminal N0 domain.	Domain
N [auth 6], O [auth 7], P [auth 8], Q [auth 9]	PF01313	Bacterial export proteins, family 3 (Bac_export_3)	Bacterial export proteins, family 3	-	Family
M [auth 5]	PF01311	Bacterial export proteins, family 1 (Bac_export_1)	Bacterial export proteins, family 1	-	Family
H [auth 0], I [auth 1], J [auth 2], K [auth 3], L [auth 4]	PF00813	FliP family (FliP)	FliP family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	Protein InvG	identical protein binding protein binding binding	establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization protein secretion by the type III secretion system transmembrane transport protein transmembrane transport	protein-containing complex type II protein secretion system complex type III protein secretion system complex cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane
AB [auth g], BB [auth h], CB [auth i], DB [auth j], EB [auth k], AB [auth g], BB [auth h], CB [auth i], DB [auth j], EB [auth k], FB [auth l], GB [auth m], HB [auth n], KA [auth R], LA [auth S], MA [auth T], NA [auth U], OA [auth V], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], UA [auth a], VA [auth b], WA [auth c], X [auth E], XA [auth d], YA [auth e], ZA [auth f]	Protein PrgH	-	-	cell periphery cellular anatomical structure plasma membrane membrane
N [auth 6], O [auth 7], P [auth 8], Q [auth 9]	Surface presentation of antigens protein SpaQ	-	organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly establishment of protein localization transport organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane
M [auth 5]	Surface presentation of antigens protein SpaR	-	localization establishment of protein localization protein targeting establishment of localization	cell periphery cellular anatomical structure plasma membrane membrane
H [auth 0], I [auth 1], J [auth 2], K [auth 3], L [auth 4]	Surface presentation of antigens protein SpaP	-	organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane
A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], F [auth AF], G [auth AG], IB [auth o], JB [auth p], KB [auth q], LB [auth r], MB [auth s], NB [auth t], OB [auth u], PB [auth v], QB [auth w], R [auth AH], RB [auth x], S [auth AI], SB [auth y], TA [auth AL], TB [auth z], UB [auth AJ], VB [auth AK]	Lipoprotein PrgK	-	establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	IPR050810	Bacterial Secretion System Channel Protein	Family
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	IPR005644	NolW-like	Domain
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	IPR004846	Type II/III secretion system, secretin-like domain	Domain
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	IPR038591	NolW-like superfamily	Homologous Superfamily
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	Family
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	IPR004845	Type II secretion system protein GspD, conserved site	Conserved Site
AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], AA [auth H], BA [auth I], CA [auth J], DA [auth K], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q], T [auth A], U [auth B], V [auth C], W [auth D], Y [auth F], Z [auth G]	IPR049034	SPI-1 type 3 secretion system secretin, N0 domain	Domain
AB [auth g], BB [auth h], CB [auth i], DB [auth j], EB [auth k], AB [auth g], BB [auth h], CB [auth i], DB [auth j], EB [auth k], FB [auth l], GB [auth m], HB [auth n], KA [auth R], LA [auth S], MA [auth T], NA [auth U], OA [auth V], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], UA [auth a], VA [auth b], WA [auth c], X [auth E], XA [auth d], YA [auth e], ZA [auth f]	IPR019029	Type III secretion system, PrgH/EprH-like	Family
AB [auth g], BB [auth h], CB [auth i], DB [auth j], EB [auth k], AB [auth g], BB [auth h], CB [auth i], DB [auth j], EB [auth k], FB [auth l], GB [auth m], HB [auth n], KA [auth R], LA [auth S], MA [auth T], NA [auth U], OA [auth V], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], UA [auth a], VA [auth b], WA [auth c], X [auth E], XA [auth d], YA [auth e], ZA [auth f]	IPR013387	Type III secretion system, PrgH/EprH	Family
N [auth 6], O [auth 7], P [auth 8], Q [auth 9]	IPR006306	Type III secretion protein HrpO	Family
N [auth 6], O [auth 7], P [auth 8], Q [auth 9]	IPR002191	Bacterial export protein family 3	Family
M [auth 5]	IPR002010	Type III secretion system inner membrane R protein	Family
M [auth 5]	IPR006304	Type III secretion protein SpaR/YscT	Family
H [auth 0], I [auth 1], J [auth 2], K [auth 3], L [auth 4]	IPR005838	Type III secretion system inner membrane P protein	Family
H [auth 0], I [auth 1], J [auth 2], K [auth 3], L [auth 4]	IPR005773	Type III secretion system, Yop virulence translocation protein R-like	Family
A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], F [auth AF], G [auth AG], IB [auth o], JB [auth p], KB [auth q], LB [auth r], MB [auth s], NB [auth t], OB [auth u], PB [auth v], QB [auth w], R [auth AH], RB [auth x], S [auth AI], SB [auth y], TA [auth AL], TB [auth z], UB [auth AJ], VB [auth AK]	IPR006182	Flagellar M-ring, N-terminal	Domain
A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], F [auth AF], G [auth AG], IB [auth o], JB [auth p], KB [auth q], LB [auth r], MB [auth s], NB [auth t], OB [auth u], PB [auth v], QB [auth w], R [auth AH], RB [auth x], S [auth AI], SB [auth y], TA [auth AL], TB [auth z], UB [auth AJ], VB [auth AK]	IPR045851	AMP-binding enzyme domain superfamily	Homologous Superfamily
A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], F [auth AF], G [auth AG], IB [auth o], JB [auth p], KB [auth q], LB [auth r], MB [auth s], NB [auth t], OB [auth u], PB [auth v], QB [auth w], R [auth AH], RB [auth x], S [auth AI], SB [auth y], TA [auth AL], TB [auth z], UB [auth AJ], VB [auth AK]	IPR043427	Lipoprotein YscJ/Flagellar M-ring protein	Family
A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], A [auth AA], B [auth AB], C [auth AC], D [auth AD], E [auth AE], F [auth AF], G [auth AG], IB [auth o], JB [auth p], KB [auth q], LB [auth r], MB [auth s], NB [auth t], OB [auth u], PB [auth v], QB [auth w], R [auth AH], RB [auth x], S [auth AI], SB [auth y], TA [auth AL], TB [auth z], UB [auth AJ], VB [auth AK]	IPR003282	Type III secretion system lipoprotein SctJ	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth AA], AA [auth H], AB [auth g], B [auth AB], BA [auth I] A [auth AA], AA [auth H], AB [auth g], B [auth AB], BA [auth I], BB [auth h], C [auth AC], CA [auth J], CB [auth i], D [auth AD], DA [auth K], DB [auth j], E [auth AE], EA [auth L], EB [auth k], F [auth AF], FA [auth M], FB [auth l], G [auth AG], GA [auth N], GB [auth m], H [auth 0], HA [auth O], HB [auth n], I [auth 1], IA [auth P], IB [auth o], J [auth 2], JA [auth Q], JB [auth p], K [auth 3], KA [auth R], KB [auth q], L [auth 4], LA [auth S], LB [auth r], M [auth 5], MA [auth T], MB [auth s], N [auth 6], NA [auth U], NB [auth t], O [auth 7], OA [auth V], OB [auth u], P [auth 8], PA [auth W], PB [auth v], Q [auth 9], QA [auth X], QB [auth w], R [auth AH], RA [auth Y], RB [auth x], S [auth AI], SA [auth Z], SB [auth y], T [auth A], TA [auth AL], TB [auth z], U [auth B], UA [auth a], UB [auth AJ], V [auth C], VA [auth b], VB [auth AK], W [auth D], WA [auth c], X [auth E], XA [auth d], Y [auth F], YA [auth e], Z [auth G], ZA [auth f]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Type III Secretion Systems	T3S injectisome needle complex

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Focussed refinement of InvGN0N1:SpaPQR:PrgHK from Salmonella SPI-1 injectisome NC-base

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

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