6P5I | pdb_00006p5i

Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CC [auth AK]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8065344 3001911 SCOP2B (2022-06-29)
AC [auth Ap]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
WB [auth Al]SCOP2B SuperfamilyRibosomal protein L39e 8095597 3001756 SCOP2B (2022-06-29)
TB [auth Ai]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
RB [auth Ag]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
QB [auth Af]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
PB [auth Ae]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
NB [auth Ac]SCOP2B SuperfamilyL30e-like 8094953 3001739 SCOP2B (2022-06-29)
LB [auth Aa]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
KB [auth AZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
JB [auth AY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
IB [auth AX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyAlpha-L RNA-binding motif 8052745 3001473 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyNucleic acid-binding proteins 8052746 3000135 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052747 3000334 SCOP2B (2022-06-29)
GB [auth AV]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
FB [auth AU]SCOP2B Superfamily60S Ribosomal protein L22e 8061156 3002158 SCOP2B (2022-06-29)
YA [auth AN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
VA [auth AJ]SCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
UA [auth AI]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
OA [auth AC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
OA [auth AC]SCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
NA [auth AB]SCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052584 3000068 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053150 3000068 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053140 3000068 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
USCOP2B SuperfamilyWinged helix DNA-binding domain 8089322 3000034 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082683 3000100 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyWinged helix DNA-binding domain 8055720 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ie6p5iI1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
CC [auth AK]e6p5iAK1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
BC [auth Ar]e6p5iAr1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
He6p5iH1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
AC [auth Ap]e6p5iAp1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
ZB [auth Ao]e6p5iAo1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
YB [auth An]e6p5iAn1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
XB [auth Am]e6p5iAm1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
WB [auth Al]e6p5iAl1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
VB [auth Ak]e6p5iAk1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
UB [auth Aj]e6p5iAj1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
TB [auth Ai]e6p5iAi1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
SB [auth Ah]e6p5iAh1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
RB [auth Ag]e6p5iAg1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
Ge6p5iG1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
QB [auth Af]e6p5iAf1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
PB [auth Ae]e6p5iAe1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
OB [auth Ad]e6p5iAd1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
NB [auth Ac]e6p5iAc1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
MB [auth Ab]e6p5iAb1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
LB [auth Aa]e6p5iAa1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
KB [auth AZ]e6p5iAZ1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
JB [auth AY]e6p5iAY1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
IB [auth AX]e6p5iAX1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
HB [auth AW]e6p5iAW1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
Fe6p5iF1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
GB [auth AV]e6p5iAV1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
FB [auth AU]e6p5iAU1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
EB [auth AT]e6p5iAT1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
DB [auth AS]e6p5iAS1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
CB [auth AR]e6p5iAR1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
BB [auth AQ]e6p5iAQ1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
AB [auth AP]e6p5iAP1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
ZA [auth AO]e6p5iAO1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
YA [auth AN]e6p5iAN1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
XA [auth AM]e6p5iAM1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
Ee6p5iE1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
WA [auth AL]e6p5iAL1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
VA [auth AJ]e6p5iAJ1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
UA [auth AI]e6p5iAI1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
TA [auth AH]e6p5iAH1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
SA [auth AG]e6p5iAG1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
RA [auth AF]e6p5iAF1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
QA [auth AE]e6p5iAE1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
PA [auth AD]e6p5iAD1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
OA [auth AC]e6p5iAC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: Ephrin_lbdF:ECOD (20:10:01)
NA [auth AB]e6p5iAB1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
De6p5iD1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
MA [auth AA]e6p5iAA1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
HA [auth h]e6p5ih1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
GA [auth g]e6p5ig1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
FA [auth f]e6p5if1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
EA [auth e]e6p5ie1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
DA [auth d]e6p5id1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Ce6p5iC1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
CA [auth c]e6p5ic1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
BA [auth b]e6p5ib1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
AA [auth a]e6p5ia1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
Ze6p5iZ1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Ye6p5iY1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Xe6p5iX1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
We6p5iW1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Ve6p5iV1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Ue6p5iU1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Te6p5iT1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Copper-bindF:ECOD (20:10:01)
Be6p5iB1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Se6p5iS1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Re6p5iR1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Qe6p5iQ1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Pe6p5iP1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Oe6p5iO1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Ne6p5iN1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Me6p5iM1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Le6p5iL1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Ke6p5iK1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)
Je6p5iJ1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: EBV-NA1F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
CC [auth AK]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
KB [auth AZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
KB [auth AZ]PF00467KOW motif (KOW)KOW motif- Family
JB [auth AY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
JB [auth AY]PF00467KOW motif (KOW)KOW motif- Family
IB [auth AX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
HB [auth AW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
PF00467KOW motif (KOW)KOW motif- Family
GB [auth AV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
CB [auth AR]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
CB [auth AR]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
CB [auth AR]PF25476Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C)Ribosomal protein L19e, C-terminal domainThis domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
AB [auth AP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
AB [auth AP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
ZA [auth AO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
YA [auth AN]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
YA [auth AN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
XA [auth AM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
PF07650KH domain (KH_2)KH domainDomain
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
WA [auth AL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
VA [auth AJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
VA [auth AJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
VA [auth AJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
UA [auth AI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
UA [auth AI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
TA [auth AH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
TA [auth AH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
SA [auth AG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
RA [auth AF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
RA [auth AF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
RA [auth AF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
QA [auth AE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
QA [auth AE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
PA [auth AD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PA [auth AD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PA [auth AD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
OA [auth AC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
OA [auth AC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
OA [auth AC]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
NA [auth AB]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
MA [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
MA [auth AA]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
eS7
CC [auth AK]uL1
BC [auth Ar]eL28
eS6
AC [auth Ap]eL43
ZB [auth Ao]eL42
YB [auth An]eL41
XB [auth Am]eL40---
WB [auth Al]eL39
VB [auth Ak]eL38---
UB [auth Aj]eL37
TB [auth Ai]eL36
SB [auth Ah]eL35
RB [auth Ag]eL34
uS7
QB [auth Af]eL33
PB [auth Ae]eL32
OB [auth Ad]eL31
NB [auth Ac]eL30
MB [auth Ab]eL29
LB [auth Aa]uL15
KB [auth AZ]eL27
JB [auth AY]uL24
IB [auth AX]eL23
HB [auth AW]eL24
eS4
GB [auth AV]uL14
FB [auth AU]eL22
EB [auth AT]eL21
DB [auth AS]eL20---
CB [auth AR]eL19
BB [auth AQ]eL18---
AB [auth AP]uL22
ZA [auth AO]uL13---
YA [auth AN]eL15
XA [auth AM]L14e
uS3
WA [auth AL]eL13---
VA [auth AJ]uL11
UA [auth AI]uL16
TA [auth AH]uL6
SA [auth AG]eL8 -
RA [auth AF]uL30
QA [auth AE]eL6
PA [auth AD]uL18
OA [auth AC]uL4
NA [auth AB]uL3
uS5---
MA [auth AA]uL2
LA [auth 8]5.8S rRNA---
KA [auth 7]5S rRNA---
JA [auth 5]28S rRNA---
IA [auth 1]IAPV-IRES---
HA [auth h]RACK1
GA [auth g]eS31
FA [auth f]eS30
EA [auth e]eS29
DA [auth d]eS28
eS1
CA [auth c]eS27
BA [auth b]eS26
AA [auth a]eS25
eS24
uS12
uS8
eS21
uS10
eS19
uS13
uS2---
eS17
uS9
uS19
uS11
uS15
eS12
uS17
eS10 -
uS4
eS8---
A [auth 2]18S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000554Small ribosomal subunit protein eS7Family
IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
CC [auth AK]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
CC [auth AK]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
CC [auth AK]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
CC [auth AK]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
CC [auth AK]IPR002143Large ribosomal subunit protein uL1Family
CC [auth AK]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
BC [auth Ar]IPR029004Ribosomal eL28/Mak16Domain
BC [auth Ar]IPR002672Large ribosomal subunit protein eL28Family
IPR014401Small ribosomal subunit protein eS6-likeFamily
IPR001377Small ribosomal subunit protein eS6Family
IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
AC [auth Ap]IPR002674Large ribosomal subunit protein eL43Family
AC [auth Ap]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Ap]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
ZB [auth Ao]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
ZB [auth Ao]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth Ao]IPR000552Large ribosomal subunit protein eL42Family
YB [auth An]IPR007836Large ribosomal subunit protein eS32Family
WB [auth Al]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
WB [auth Al]IPR000077Large ribosomal subunit protein eL39Family
WB [auth Al]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
UB [auth Aj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
UB [auth Aj]IPR001569Large ribosomal subunit protein eL37Family
UB [auth Aj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
UB [auth Aj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TB [auth Ai]IPR000509Large ribosomal subunit protein eL36Family
TB [auth Ai]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
SB [auth Ah]IPR001854Large ribosomal subunit protein uL29Family
SB [auth Ah]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
SB [auth Ah]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
SB [auth Ah]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
RB [auth Ag]IPR008195Large ribosomal subunit protein eL34Family
RB [auth Ag]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
RB [auth Ag]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
IPR000235Small ribosomal subunit protein uS7Family
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IPR023798Small ribosomal subunit protein uS7 domainDomain
IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
QB [auth Af]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
QB [auth Af]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
QB [auth Af]IPR001780Large ribosomal subunit protein eL33Family
QB [auth Af]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
PB [auth Ae]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
PB [auth Ae]IPR001515Large ribosomal subunit protein eL32Family
PB [auth Ae]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
OB [auth Ad]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
OB [auth Ad]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
OB [auth Ad]IPR000054Large ribosomal subunit protein eL31Family
NB [auth Ac]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
NB [auth Ac]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
NB [auth Ac]IPR000231Large ribosomal subunit protein eL30Family
NB [auth Ac]IPR039109Large ribosomal subunit protein eL30-likeFamily
NB [auth Ac]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
MB [auth Ab]IPR002673Large ribosomal subunit protein eL29Family
LB [auth Aa]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
LB [auth Aa]IPR021131Large ribosomal subunit protein uL15/eL18Domain
LB [auth Aa]IPR030878Large ribosomal subunit protein uL15Family
LB [auth Aa]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
LB [auth Aa]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
KB [auth AZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
KB [auth AZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
KB [auth AZ]IPR005824KOWDomain
KB [auth AZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KB [auth AZ]IPR001141Large ribosomal subunit protein eL27Family
KB [auth AZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
JB [auth AY]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
JB [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
JB [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
JB [auth AY]IPR005824KOWDomain
JB [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JB [auth AY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
IB [auth AX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IB [auth AX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IB [auth AX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
IB [auth AX]IPR019985Large ribosomal subunit protein uL23Family
IB [auth AX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
IB [auth AX]IPR013025Large ribosomal subunit protein uL23-likeFamily
HB [auth AW]IPR011017TRASH domainDomain
HB [auth AW]IPR056366Large ribosomal subunit protein eL24Family
HB [auth AW]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
HB [auth AW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
HB [auth AW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
IPR002942RNA-binding S4 domainDomain
IPR013845Small ribosomal subunit protein eS4, central regionDomain
IPR000876Small ribosomal subunit protein eS4Family
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IPR005824KOWDomain
GB [auth AV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
GB [auth AV]IPR000218Large ribosomal subunit protein uL14Family
GB [auth AV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
FB [auth AU]IPR002671Large ribosomal subunit protein eL22Family
FB [auth AU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
EB [auth AT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
EB [auth AT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
EB [auth AT]IPR001147Large ribosomal subunit protein eL21Family
EB [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CB [auth AR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
CB [auth AR]IPR057259Ribosomal protein L19e, N-terminal domainDomain
CB [auth AR]IPR039547Large ribosomal subunit protein eL19Family
CB [auth AR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
CB [auth AR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
CB [auth AR]IPR057260Ribosomal protein L19e, C-terminal domainDomain
CB [auth AR]IPR000196Large ribosomal subunit protein eL19 domainDomain
CB [auth AR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
AB [auth AP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
AB [auth AP]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
AB [auth AP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
AB [auth AP]IPR001063Large ribosomal subunit protein uL22Family
AB [auth AP]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
YA [auth AN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
YA [auth AN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
YA [auth AN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
YA [auth AN]IPR000439Large ribosomal subunit protein eL15Family
XA [auth AM]IPR039660Large ribosomal subunit protein eL14Family
XA [auth AM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
XA [auth AM]IPR002784Large ribosomal subunit protein eL14 domainDomain
XA [auth AM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
IPR057258Small ribosomal subunit protein uS3Family
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
IPR004044K Homology domain, type 2Domain
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
VA [auth AJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
VA [auth AJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
VA [auth AJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
VA [auth AJ]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
VA [auth AJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
VA [auth AJ]IPR002132Large ribosomal subunit protein uL5Family
UA [auth AI]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
UA [auth AI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
UA [auth AI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
UA [auth AI]IPR016180Large ribosomal subunit protein uL16 domainDomain
UA [auth AI]IPR047873Large ribosomal subunit protein uL16Family
TA [auth AH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
TA [auth AH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
TA [auth AH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
TA [auth AH]IPR000702Large ribosomal subunit protein uL6-likeFamily
SA [auth AG]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
SA [auth AG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
SA [auth AG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
SA [auth AG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
SA [auth AG]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
RA [auth AF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
RA [auth AF]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
RA [auth AF]IPR039699Large ribosomal subunit protein uL30Family
RA [auth AF]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
RA [auth AF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
RA [auth AF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
RA [auth AF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
QA [auth AE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
QA [auth AE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
QA [auth AE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
QA [auth AE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
QA [auth AE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QA [auth AE]IPR000915Large ribosomal subunit protein eL6Family
PA [auth AD]IPR057268Large ribosomal subunit protein uL18Family
PA [auth AD]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
PA [auth AD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
OA [auth AC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
OA [auth AC]IPR002136Large ribosomal subunit protein uL4Family
OA [auth AC]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
OA [auth AC]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
OA [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
NA [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
NA [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
NA [auth AB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
NA [auth AB]IPR000597Large ribosomal subunit protein uL3Family
NA [auth AB]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
MA [auth AA]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
MA [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
MA [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth AA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
MA [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
MA [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
MA [auth AA]IPR002171Large ribosomal subunit protein uL2Family
HA [auth h]IPR019775WD40 repeat, conserved siteConserved Site
HA [auth h]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
HA [auth h]IPR045223Small ribosomal subunit protein RACK1-likeFamily
HA [auth h]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
HA [auth h]IPR001680WD40 repeatRepeat
HA [auth h]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
GA [auth g]IPR019954Ubiquitin conserved siteConserved Site
GA [auth g]IPR000626Ubiquitin-like domainDomain
GA [auth g]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
GA [auth g]IPR002906Small ribosomal subunit protein eS31Domain
GA [auth g]IPR019956Ubiquitin domainDomain
GA [auth g]IPR050158Ubiquitin and ubiquitin-likeFamily
GA [auth g]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
GA [auth g]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth f]IPR039415Ubiquitin-like protein FUBIDomain
FA [auth f]IPR019956Ubiquitin domainDomain
FA [auth f]IPR019954Ubiquitin conserved siteConserved Site
FA [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
FA [auth f]IPR000626Ubiquitin-like domainDomain
FA [auth f]IPR006846Small ribosomal subunit protein eS30Family
EA [auth e]IPR001209Small ribosomal subunit protein uS14Family
EA [auth e]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
EA [auth e]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
EA [auth e]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
DA [auth d]IPR028626Ribosomal protein eS28 conserved siteConserved Site
DA [auth d]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DA [auth d]IPR000289Small ribosomal subunit protein eS28Family
IPR001593Small ribosomal subunit protein eS1Family
IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
CA [auth c]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
CA [auth c]IPR000592Small ribosomal subunit protein eS27Family
CA [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth b]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
BA [auth b]IPR000892Small ribosomal subunit protein eS26Family
BA [auth b]IPR047864Ribosomal protein eS26, conserved siteConserved Site
AA [auth a]IPR004977Small ribosomal subunit protein eS25Family
AA [auth a]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
IPR001976Small ribosomal subunit protein eS24Family
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
IPR006032Small ribosomal subunit protein uS12Family
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
IPR000630Small ribosomal subunit protein uS8Family
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
IPR001931Small ribosomal subunit protein eS21Family
IPR001848Small ribosomal subunit protein uS10Family
IPR027486Small ribosomal subunit protein uS10 domainDomain
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
IPR001266Small ribosomal subunit protein eS19Family
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
IPR001892Small ribosomal subunit protein uS13Family
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
IPR001210Small ribosomal subunit protein eS17Family
IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR000754Small ribosomal subunit protein uS9Family
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IPR002222Small ribosomal subunit protein uS19Family
IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
IPR001971Small ribosomal subunit protein uS11Family
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
IPR000589Small ribosomal subunit protein uS15Family
IPR000530Small ribosomal subunit protein eS12Family
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR000266Small ribosomal subunit protein uS17Family
IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
IPR037447Small ribosomal subunit protein eS10Family
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IPR005326Plectin/eS10, N-terminalDomain
IPR002942RNA-binding S4 domainDomain
IPR022801Small ribosomal subunit protein uS4Family
IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily