6P47 | pdb_00006p47

Cryo-EM structure of TMEM16F in digitonin without calcium

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APDEase_Ie6p47A1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: PDEase_IECOD (v294.1)
BLyse6p47B1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: LysECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF16178Anoctamin, dimerisation domain (Anoct_dimer)Anoctamin, dimerisation domainThis entry represents the dimerisation domain of anoctamin family of proteins. Seven members can be divided into two subfamilies; Ca2-dependent Cl(-) channels (TMEM16A and 16B) and Ca2-dependent lipid scramblases (TMEM16C, 16D, 16F, 16G, and 16J). Th ...This entry represents the dimerisation domain of anoctamin family of proteins. Seven members can be divided into two subfamilies; Ca2-dependent Cl(-) channels (TMEM16A and 16B) and Ca2-dependent lipid scramblases (TMEM16C, 16D, 16F, 16G, and 16J). This domain is responsible for creating the homodimeric architecture of the chloride-channel proteins.
Domain
A, B
PF04547Calcium-activated chloride channel (Anoctamin)Calcium-activated chloride channel- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Anoctamin-6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR032394Anoctamin, dimerisation domainDomain
A, B
IPR007632AnoctaminFamily
A, B
IPR049452Anoctamin, transmembrane domainDomain

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B
OPMTransmembraneAlpha-helical polytopicCalcium-activated chloride channelAnoctamin (TMEM16) family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALTMEM16 Family ProteinsTMEM16F scramblase & ion channel in digitonin with bound Ca2+