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 6P0X | pdb_00006p0x

Structure of the N-terminal domain of effector protein SpvB from Salmonella typhimurium strain LT2

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyEffector protein SpvB, N-terminal domain-like 8102234 3002724 SCOP2B (2022-06-29)
ASCOP2 FamilyNTD-SpvB-like 8102229 4007457 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyEffector protein SpvB, N-terminal domain-like 8102234 3002724 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BTetR_Ne6p0xB1 A: alpha arraysX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: TetR_NECOD (v295.2)
AGlyco_hydro_32Ne6p0xA1 A: alpha arraysX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Glyco_hydro_32NECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Salmonella plasmid virulence: SpvB -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR003540ADP ribosyltransferaseDomain
A, B
IPR003284Salmonella virulence plasmid 65kDa B proteinFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
MLY Parent Component: LYS

:  AA0075

:  N6,N6-dimethyl-L-lysine MOD:00084