Asymmetric focused reconstruction of human norovirus GI.1 Norwalk strain VLP asymmetric unit in T=3 symmetry
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Astrovirus capsid protein P1 domain-like | 8093126 | 3002535 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8033958 | 3000918 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Astrovirus capsid protein P1 domain-like | 8093126 | 3002535 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Norovirus P2 domain-like | 8093128 | 3002678 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Astrovirus capsid protein P1 domain-like | 8093126 | 3002535 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Norovirus P2 domain-like | 8093128 | 3002678 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Astrovirus capsid protein P1 domain-like | 8093126 | 3002535 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8033958 | 3000918 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Norovirus P2 domain-like | 8093128 | 3002678 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Astrovirus capsid protein P1 domain-like | 8093126 | 3002535 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8033958 | 3000918 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Astrovirus capsid protein P1 domain-like | 8093126 | 3002535 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF08435 | e6outA3 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: PF08435 | ECOD (1.6) |
A | PF00915 | e6outA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00915 | ECOD (1.6) |
B | PF08435 | e6outB1 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: PF08435 | ECOD (1.6) |
B | PF00915 | e6outB3 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00915 | ECOD (1.6) |
C | PF08435 | e6outC1 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: PF08435 | ECOD (1.6) |
C | PF00915 | e6outC3 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00915 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Capsid protein VP1 | | - | |