6OSV | pdb_00006osv

Potent and Selective Antitumor Antibody Targeting a Membrane-Proximal Epitope of ROR2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
SAbDab Antibody Annotation
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A [auth L]	d6osvl_	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	automated matches	(Oryctolagus cuniculus ) [TaxId: 9986 ],	SCOPe (2.08)
B [auth K]	d6osvk_	Small proteins	Kringle-like	Kringle-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C [auth H]	d6osvh_	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	automated matches	(Oryctolagus cuniculus ) [TaxId: 9986 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth L]	ABC_tran	e6osvL1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: ABC_tran	ECOD (v294.1)
B [auth K]	Cation_ATPase_C,Cation_ATPase_N	e6osvK1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Cation_ATPase_C,Cation_ATPase_N	ECOD (v294.1)
C [auth H]	ABC_tran	e6osvH1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: ABC_tran	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth K]	2.40.20.10	Mainly Beta	Beta Barrel	Plasminogen Kringle 4	Plasminogen Kringle 4	CATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
A [auth L]	Light Chain	IGKV1	Kappa	tyrosine-protein kinase transmembrane receptor ror2	SAbDab (2026-04-17)
C [auth H]	Heavy Chain	IGHV3	-	tyrosine-protein kinase transmembrane receptor ror2	SAbDab (2026-04-17)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth K]	PF00051	Kringle domain (Kringle)	Kringle domain	Kringle domains have been found in plasminogen, hepatocyte growth factors, prothrombin, and apolipoprotein A. Structure is disulfide-rich, nearly all-beta.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth L]	Antibody light chain variable region	-	-	-
B [auth K]	Tyrosine-protein kinase transmembrane receptor ROR2	molecular transducer activity coreceptor activity signaling receptor activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity molecular transducer activity coreceptor activity signaling receptor activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein binding kinase binding mitogen-activated protein kinase kinase kinase binding enzyme binding protein kinase binding cation binding metal ion binding Wnt-protein binding	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction cell communication positive regulation of locomotion regulation of cell motility positive regulation of biological process positive regulation of cell migration regulation of locomotion cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction cell communication positive regulation of locomotion regulation of cell motility positive regulation of biological process positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion positive regulation of cellular process cell surface receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway Wnt signaling pathway	membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular organelle cellular anatomical structure bounding membrane of organelle cytoplasmic vesicle vesicle membrane clathrin-coated vesicle endocytic vesicle membrane coated vesicle vesicle endocytic vesicle clathrin-coated vesicle membrane membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular organelle cellular anatomical structure bounding membrane of organelle cytoplasmic vesicle vesicle membrane clathrin-coated vesicle endocytic vesicle membrane coated vesicle vesicle endocytic vesicle clathrin-coated vesicle membrane clathrin-coated endocytic vesicle membrane membrane intracellular membrane-bounded organelle clathrin-coated endocytic vesicle cytoplasmic vesicle membrane coated vesicle membrane organelle cytoplasm organelle membrane cell periphery plasma membrane protein-containing complex signaling receptor complex axon cell projection neuron projection plasma membrane bounded cell projection
C [auth H]	Antibody heavy chain variable region	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth K]	IPR036790	Frizzled cysteine-rich domain superfamily	Homologous Superfamily
B [auth K]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
B [auth K]	IPR003598	Immunoglobulin subtype 2	Domain
B [auth K]	IPR008266	Tyrosine-protein kinase, active site	Active Site
B [auth K]	IPR018056	Kringle, conserved site	Conserved Site
B [auth K]	IPR000719	Protein kinase domain	Domain
B [auth K]	IPR003599	Immunoglobulin domain subtype	Domain
B [auth K]	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
B [auth K]	IPR013098	Immunoglobulin I-set	Domain
B [auth K]	IPR016247	Tyrosine-protein kinase, receptor ROR	Family
B [auth K]	IPR013806	Kringle-like fold	Homologous Superfamily
B [auth K]	IPR038178	Kringle superfamily	Homologous Superfamily
B [auth K]	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
B [auth K]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth K]	IPR050122	Receptor Tyrosine Kinase	Family
B [auth K]	IPR007110	Immunoglobulin-like domain	Domain
B [auth K]	IPR020067	Frizzled domain	Domain
B [auth K]	IPR000001	Kringle	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B [auth K]	Pharos: Q01974	autosomal recessive Robinow syndrome brachydactyly type B1 Robinow syndrome brachydactyly type B colorectal adenocarcinoma intellectual disability medulloblastoma psoriasis ROBINOW SYNDROME, AUTOSOMAL RECESSIVE, WITH BRACHY-SYN-POLYDACTYLY brachydactyly cystic fibrosis malignant ependymoma osteogenesis imperfecta hydrolethalus syndrome malignant mesothelioma autosomal recessive Robinow syndrome brachydactyly type B1 Robinow syndrome brachydactyly type B colorectal adenocarcinoma intellectual disability medulloblastoma psoriasis ROBINOW SYNDROME, AUTOSOMAL RECESSIVE, WITH BRACHY-SYN-POLYDACTYLY brachydactyly cystic fibrosis malignant ependymoma osteogenesis imperfecta hydrolethalus syndrome malignant mesothelioma ovarian cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.