6OKN
OX40R (TNFRSF4) bound to Fab 1A7
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- SAbDab Antibody Annotation
- Thera-SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
F [auth R] | SCOP2B Superfamily | TNF receptor-like | 8042265 | 3000971 | SCOP2B (2022-06-29) |
F [auth R] | SCOP2B Superfamily | TNF receptor-like | 8042266 | 3000971 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | TNF receptor-like | 8042265 | 3000971 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | TNF receptor-like | 8042266 | 3000971 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF07654 | e6oknC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
C | PF07686 | e6oknC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
A | PF07654 | e6oknA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
A | PF07686 | e6oknA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B | PF07654 | e6oknB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
B | PF07686 | e6oknB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D | PF07654 | e6oknD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
D | PF07686 | e6oknD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
F [auth R] | F_UNCLASSIFIED | e6oknR1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth R] | PF00020 | e6oknR2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: PF00020 | ECOD (1.6) |
E | F_UNCLASSIFIED | e6oknE2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF00020 | e6oknE1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: PF00020 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
E | 2.10.50.10 | Mainly Beta | Ribbon | Tumor Necrosis Factor Receptor, subunit A | domain 2 | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
Fab 1A7 | VH-CH1 | Homo sapiens (human) | IGHV1-46*01, IGHV1-46*03, IGHJ6*01, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05, IGHG1*12, IGHG1*14, IGHG1*13, IGHG1*09, IGHG1*10, IGHG1*07, IGHG1*11 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202417-0) | |
Fab 1A7 | L-KAPPA | Homo sapiens (human) | IGKV1-39*01, IGKV1D-39*01, IGKJ1*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202417-0) | |
E, F [auth R] | Tumor necrosis factor receptor superfamily member 4 | FGF19 | Homo sapiens (human) | TNFRSF4*01 | M-LIKE-DOMAIN TNFR-CYS | RPI | 4TNFR-CYS | IMGT (202417-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV1 | - | tumor necrosis factor receptor superfamily member 4 | SAbDab (2024-05-03) | |
Light Chain | IGKV1 | Kappa | tumor necrosis factor receptor superfamily member 4 | SAbDab (2024-05-03) |
Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage
Chain | Name | Target | Provenance Source |
---|---|---|---|
Vonlerolizumab | TNFRSF4/CD134/OX40 | Therapeutic SAbDab (2024-05-03) | |
Vonlerolizumab | TNFRSF4/CD134/OX40 | Therapeutic SAbDab (2024-05-03) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E, F [auth R] | PF00020 | TNFR/NGFR cysteine-rich region (TNFR_c6) | TNFR/NGFR cysteine-rich region | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E, F [auth R] | IPR020445 | Tumour necrosis factor receptor 4 | Family |
E, F [auth R] | IPR001368 | TNFR/NGFR cysteine-rich region | Domain |
E, F [auth R] | IPR034022 | Tumour necrosis factor receptor 4, N-terminal | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
E, F [auth R] | P43489 | :