6OFG
In vitro polymerized PrgI V67A filaments
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth P] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
B [auth Q] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
C [auth R] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
D [auth K] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
E [auth L] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
F [auth M] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
G [auth N] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
H [auth O] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
I [auth F] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
J [auth G] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
K [auth H] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
L [auth I] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
M [auth J] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
N [auth A] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
O [auth B] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
P [auth C] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Q [auth D] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
R [auth E] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth P] | T3SS_needle_F | e6ofgP1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
B [auth Q] | T3SS_needle_F | e6ofgQ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
C [auth R] | T3SS_needle_F | e6ofgR1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
D [auth K] | T3SS_needle_F | e6ofgK1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
E [auth L] | T3SS_needle_F | e6ofgL1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
F [auth M] | T3SS_needle_F | e6ofgM1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
G [auth N] | T3SS_needle_F | e6ofgN1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
H [auth O] | T3SS_needle_F | e6ofgO1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
I [auth F] | T3SS_needle_F | e6ofgF1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
J [auth G] | T3SS_needle_F | e6ofgG1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
K [auth H] | T3SS_needle_F | e6ofgH1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
L [auth I] | T3SS_needle_F | e6ofgI1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
M [auth J] | T3SS_needle_F | e6ofgJ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
N [auth A] | T3SS_needle_F | e6ofgA1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
O [auth B] | T3SS_needle_F | e6ofgB1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
P [auth C] | T3SS_needle_F | e6ofgC1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Q [auth D] | T3SS_needle_F | e6ofgD1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
R [auth E] | T3SS_needle_F | e6ofgE1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09392 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F) | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037203 | Type III secretion, needle-protein-like superfamily | Homologous Superfamily | |
IPR021123 | Type III secretion, needle-protein-like | Family | |
IPR011841 | Type III secretion system, needle protein | Family |