6OEC | pdb_00006oec

Yeast Spc42 Trimeric Coiled-Coil Amino Acids 181-211 fused to PDB: 3H5I

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CheY-like	8072874	3001156	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	Response_reg	e6oecL1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
K	Response_reg	e6oecK1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
J	Response_reg	e6oecJ1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
I	Response_reg	e6oecI1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
H	Response_reg	e6oecH1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
G	Response_reg	e6oecG1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
F	Response_reg	e6oecF1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
E	Response_reg	e6oecE1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
D	Response_reg	e6oecD1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
C	Response_reg	e6oecC1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
B	Response_reg	e6oecB1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)
A	Response_reg	e6oecA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: CheY-like	F: Response_reg	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF00072	Response regulator receiver domain (Response_reg)	Response regulator receiver domain	This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Response regulator/sensory box protein/GGDEF domain protein,Spindle pole body component SPC42	structural constituent of cytoskeleton structural molecule activity transferase activity nucleotidyltransferase activity catalytic activity diguanylate cyclase activity transferase activity, transferring phosphorus-containing groups cation binding ion binding binding metal ion binding small molecule binding	spindle pole body duplication microtubule organizing center organization microtubule cytoskeleton organization cellular component organization cellular component biogenesis organelle organization cellular component assembly spindle pole body organization cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization cell cycle process spindle pole body duplication microtubule organizing center organization microtubule cytoskeleton organization cellular component organization cellular component biogenesis organelle organization cellular component assembly spindle pole body organization cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization cell cycle process regulation of cytoskeleton organization regulation of microtubule polymerization or depolymerization regulation of cellular process regulation of cellular component organization regulation of protein-containing complex assembly microtubule polymerization or depolymerization protein-containing complex assembly protein polymerization regulation of biological process protein-containing complex organization biological regulation regulation of microtubule-based process microtubule polymerization regulation of cellular component biogenesis regulation of microtubule nucleation regulation of organelle organization microtubule nucleation regulation of microtubule polymerization regulation of protein polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of microtubule cytoskeleton organization cellular response to stimulus phosphorelay signal transduction system response to stimulus signaling intracellular signal transduction cell communication signal transduction	intracellular anatomical structure intermediate layer of spindle pole body intracellular membraneless organelle intracellular organelle microtubule organizing center cellular anatomical structure cytoskeleton organelle membraneless organelle spindle pole body microtubule cytoskeleton central plaque of spindle pole body cytoplasm membrane-bounded organelle intracellular anatomical structure intermediate layer of spindle pole body intracellular membraneless organelle intracellular organelle microtubule organizing center cellular anatomical structure cytoskeleton organelle membraneless organelle spindle pole body microtubule cytoskeleton central plaque of spindle pole body cytoplasm membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR021611	Spindle pole body component Spc42	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR035965	PAS domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR000700	PAS-associated, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR000014	PAS domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR011006	CheY-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR050469	Bacterial Diguanylate Cyclase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR000160	GGDEF domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR001789	Signal transduction response regulator, receiver domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR029787	Nucleotide cyclase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.