6ODM | pdb_00006odm

Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
O,
P [auth B]		Large tegument protein deneddylase
M [auth G],
N [auth K]		Capsid vertex component 2-
L [auth C]Capsid vertex component 1-
J [auth 6],
K [auth 7],
R [auth H],
S [auth A]		Triplex capsid protein 2 -
I [auth 5],
Q [auth D]		Triplex capsid protein 1
E [auth L],
F [auth P],
G [auth E],
H [auth F]		Small capsomere-interacting protein-
A [auth T],
B [auth W],
C [auth S],
D [auth X]		Major capsid protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
O,
P [auth B]		IPR005210Herpesvirus large tegument protein deneddylaseDomain
O,
P [auth B]		IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
O,
P [auth B]		IPR006928Herpesvirus large tegument protein, USP domainDomain
O,
P [auth B]		IPR034702Large tegument protein deneddylaseFamily
M [auth G],
N [auth K]		IPR002493Herpesvirus UL25Family
L [auth C]IPR007640Herpesvirus capsid vertex component 1Family
J [auth 6],
K [auth 7],
R [auth H],
S [auth A]		IPR002690Herpesvirus capsid protein 2Family
I [auth 5],
Q [auth D]		IPR004999Herpesvirus capsid shell protein 1Family
E [auth L],
F [auth P],
G [auth E],
H [auth F]		IPR007584Herpesvirus UL35Family
A [auth T],
B [auth W],
C [auth S],
D [auth X]		IPR000912Herpesvirus major capsid proteinFamily
A [auth T],
B [auth W],
C [auth S],
D [auth X]		IPR023233Herpesvirus major capsid protein, upper domain superfamilyHomologous Superfamily