Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| N [auth P] | SCOP2B Superfamily | ARM repeat-like | 8033221 | 3000116 | SCOP2B (2022-06-29) |
| A [auth O] | SCOP2B Superfamily | Vacuolar ATP synthase subunit C | 8042806 | 3001744 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| N [auth P] | Skp1,Skp1_POZ | e6o7xP1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| K [auth I] | Skp1,Skp1_POZ | e6o7xI1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| P [auth G] | Skp1,Skp1_POZ | e6o7xG1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| M [auth K] | Skp1,Skp1_POZ | e6o7xK1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| J | Skp1,Skp1_POZ | e6o7xJ1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| L | Skp1,Skp1_POZ | e6o7xL1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| O [auth H] | Skp1,Skp1_POZ | e6o7xH1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| E [auth F] | Skp1,Skp1_POZ | e6o7xF1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| I [auth D] | Skp1,Skp1_POZ | e6o7xD1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| G [auth B] | Skp1,Skp1_POZ | e6o7xB1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| D [auth E] | Skp1,Skp1_POZ | e6o7xE1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| F [auth A] | Skp1,Skp1_POZ | e6o7xA1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| H [auth C] | Skp1,Skp1_POZ | e6o7xC1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| C [auth N] | Skp1,Skp1_POZ | e6o7xN1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| B [auth M] | Skp1,Skp1_POZ | e6o7xM1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| CA [auth o] | Skp1,Skp1_POZ | e6o7xo1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| BA [auth n] | Skp1,Skp1_POZ | e6o7xn1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| V [auth h] | Skp1,Skp1_POZ | e6o7xh1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| W [auth i] | Skp1,Skp1_POZ | e6o7xi1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| X [auth j] | Skp1,Skp1_POZ | e6o7xj1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| Y [auth k] | Skp1,Skp1_POZ | e6o7xk1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| Z [auth l] | Skp1,Skp1_POZ | e6o7xl1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| U [auth g] | Skp1,Skp1_POZ | e6o7xg1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| AA [auth m] | Skp1,Skp1_POZ | e6o7xm1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| T [auth d] | Skp1,Skp1_POZ | e6o7xd1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
| A [auth O] | Skp1,Skp1_POZ | e6o7xO1 | A: alpha bundles | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: Skp1,Skp1_POZ | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| N [auth P] | PF11698 | V-ATPase subunit H (V-ATPase_H_C) | V-ATPase subunit H | - | Repeat |
| N [auth P] | PF03224 | V-ATPase subunit H (V-ATPase_H_N) | V-ATPase subunit H | - | Repeat |
| K [auth I], M [auth K], P [auth G] | PF01991 | ATP synthase (E/31 kDa) subunit (vATP-synt_E) | ATP synthase (E/31 kDa) subunit | - | Family |
| K [auth I], M [auth K], P [auth G] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| J, L, O [auth H] | PF03179 | Vacuolar (H+)-ATPase G subunit (V-ATPase_G) | Vacuolar (H+)-ATPase G subunit | - | Coiled-coil |
| J, L, O [auth H] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| E [auth F], G [auth B], I [auth D] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
| E [auth F], G [auth B], I [auth D] | PF20520 | V0 complex accessory subunit Ac45/VOA1 transmembrane domain (Ac45-VOA1_TM) | V0 complex accessory subunit Ac45/VOA1 transmembrane domain | This entry represents the transmembrane domain from ER/Golgi membrane proteins including V0 complex accessory subunit Ac45 (ATP6AP1, also known as V-type proton ATPase subunit S1) from animals and the yeast homologue V0 assembly protein 1 (VOA1) whic ... | Domain |
| E [auth F], G [auth B], I [auth D] | PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain |
| E [auth F], G [auth B], I [auth D] | PF01992 | ATP synthase (C/AC39) subunit (vATP-synt_AC39) | ATP synthase (C/AC39) subunit | - | Family |
| E [auth F], G [auth B], I [auth D] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
| D [auth E], F [auth A], H [auth C] | PF05493 | ATP synthase subunit H (ATP_synt_H) | ATP synthase subunit H | - | Family |
| D [auth E], F [auth A], H [auth C] | PF01496 | V-type ATPase 116kDa subunit family (V_ATPase_I) | V-type ATPase 116kDa subunit family | - | Family |
| D [auth E], F [auth A], H [auth C] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| C [auth N] | PF01990 | ATP synthase (F/14-kDa) subunit (ATP-synt_F) | ATP synthase (F/14-kDa) subunit | - | Family |
| C [auth N] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| B [auth M] | PF01813 | ATP synthase subunit D (ATP-synt_D) | ATP synthase subunit D | - | Family |
| B [auth M] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| A [auth O] | PF03223 | V-ATPase subunit C (V-ATPase_C) | V-ATPase subunit C | - | Family |
| A [auth O] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Vacuolar ATPase (V-ATPase) | V-ATPase, Vph1-VO isoform |














