Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| L [auth O] | SCOP2B Superfamily | Vacuolar ATP synthase subunit C | 8042806 | 3001744 | SCOP2B (2022-06-29) |
| K [auth P] | SCOP2B Superfamily | ARM repeat-like | 8033221 | 3000116 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L [auth O] | e6o7vO1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| K [auth P] | e6o7vP1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| P [auth I] | e6o7vI1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| N [auth G] | e6o7vG1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| J [auth K] | e6o7vK1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| O [auth J] | e6o7vJ1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| M [auth H] | e6o7vH1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| I [auth L] | e6o7vL1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| H [auth F] | e6o7vF1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| F [auth D] | e6o7vD1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| D [auth B] | e6o7vB1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| G [auth E] | e6o7vE1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| E [auth C] | e6o7vC1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| C [auth A] | e6o7vA1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| B [auth N] | e6o7vN1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| CA [auth o] | e6o7vo1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| Z [auth l] | e6o7vl1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| Y [auth k] | e6o7vk1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| X [auth j] | e6o7vj1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| W [auth i] | e6o7vi1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| V [auth h] | e6o7vh1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| U [auth g] | e6o7vg1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| BA [auth n] | e6o7vn1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| AA [auth m] | e6o7vm1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| T [auth d] | e6o7vd1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) | |
| A [auth M] | e6o7vM1 | A: PriB N-terminal domain-like | X: Rubredoxin-related | H: Aconitase iron-sulfur domain | T: Skp1,Skp1_POZ | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| L [auth O] | PF03223 | V-ATPase subunit C (V-ATPase_C) | V-ATPase subunit C | - | Family |
| L [auth O] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| K [auth P] | PF11698 | V-ATPase subunit H (V-ATPase_H_C) | V-ATPase subunit H | - | Repeat |
| K [auth P] | PF03224 | V-ATPase subunit H (V-ATPase_H_N) | V-ATPase subunit H | - | Repeat |
| J [auth K], N [auth G], P [auth I] | PF01991 | ATP synthase (E/31 kDa) subunit (vATP-synt_E) | ATP synthase (E/31 kDa) subunit | - | Family |
| J [auth K], N [auth G], P [auth I] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| I [auth L], M [auth H], O [auth J] | PF03179 | Vacuolar (H+)-ATPase G subunit (V-ATPase_G) | Vacuolar (H+)-ATPase G subunit | - | Coiled-coil |
| I [auth L], M [auth H], O [auth J] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| D [auth B], F [auth D], H [auth F] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
| D [auth B], F [auth D], H [auth F] | PF20520 | V0 complex accessory subunit Ac45/VOA1 transmembrane domain (Ac45-VOA1_TM) | V0 complex accessory subunit Ac45/VOA1 transmembrane domain | This entry represents the transmembrane domain from ER/Golgi membrane proteins including V0 complex accessory subunit Ac45 (ATP6AP1, also known as V-type proton ATPase subunit S1) from animals and the yeast homologue V0 assembly protein 1 (VOA1) whic ... | Domain |
| D [auth B], F [auth D], H [auth F] | PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain |
| D [auth B], F [auth D], H [auth F] | PF01992 | ATP synthase (C/AC39) subunit (vATP-synt_AC39) | ATP synthase (C/AC39) subunit | - | Family |
| D [auth B], F [auth D], H [auth F] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
| C [auth A], E [auth C], G [auth E] | PF05493 | ATP synthase subunit H (ATP_synt_H) | ATP synthase subunit H | - | Family |
| C [auth A], E [auth C], G [auth E] | PF01496 | V-type ATPase 116kDa subunit family (V_ATPase_I) | V-type ATPase 116kDa subunit family | - | Family |
| C [auth A], E [auth C], G [auth E] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| B [auth N] | PF01990 | ATP synthase (F/14-kDa) subunit (ATP-synt_F) | ATP synthase (F/14-kDa) subunit | - | Family |
| B [auth N] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
| A [auth M] | PF01813 | ATP synthase subunit D (ATP-synt_D) | ATP synthase subunit D | - | Family |
| A [auth M] | PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Vacuolar ATPase (V-ATPase) | V-ATPase, Vph1-VO isoform |














