6O7T | pdb_00006o7t

Saccharomyces cerevisiae V-ATPase Vph1-VO

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
N [auth o]Skp1,Skp1_POZe6o7to1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
M [auth n]Skp1,Skp1_POZe6o7tn1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
L [auth m]Skp1,Skp1_POZe6o7tm1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
K [auth l]Skp1,Skp1_POZe6o7tl1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
J [auth k]Skp1,Skp1_POZe6o7tk1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
I [auth j]Skp1,Skp1_POZe6o7tj1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
H [auth i]Skp1,Skp1_POZe6o7ti1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
G [auth h]Skp1,Skp1_POZe6o7th1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
F [auth g]Skp1,Skp1_POZe6o7tg1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)
D [auth d]Skp1,Skp1_POZe6o7td1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Skp1,Skp1_POZECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth c]1.20.120.610 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) lithium bound rotor ring of v- atpaseCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
O [auth e]V-type proton ATPase subunit e
N [auth o]V-type proton ATPase subunit c'
V-type proton ATPase subunit c
E [auth f]Putative protein YPR170W-B
D [auth d]V-type proton ATPase subunit d
C [auth c]V-type proton ATPase subunit c''
B [auth b]V0 assembly protein 1
A [auth a]V-type proton ATPase subunit a, vacuolar isoform

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
O [auth e]IPR008389ATPase, V0 complex, subunit e1/e2Family
N [auth o]IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
N [auth o]IPR002379V-ATPase proteolipid subunit C-like domainDomain
N [auth o]IPR011555V-ATPase proteolipid subunit C, eukaryoticFamily
N [auth o]IPR000245V-ATPase proteolipid subunitFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR011555V-ATPase proteolipid subunit C, eukaryoticFamily
IPR000245V-ATPase proteolipid subunitFamily
E [auth f]IPR056552Ribonucl_KappaUnknown
E [auth f]IPR026770Ribonuclease kappaFamily
D [auth d]IPR044911V-type ATP synthase C/D subunit, domain 3 superfamilyHomologous Superfamily
D [auth d]IPR002843ATPase, V0 complex, C/D subunitFamily
D [auth d]IPR036079V-type ATP synthase subunit C/D subunit superfamilyHomologous Superfamily
D [auth d]IPR035067V-type ATPase subunit C/DHomologous Superfamily
D [auth d]IPR016727ATPase, V0 complex, subunit DFamily
C [auth c]IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
C [auth c]IPR002379V-ATPase proteolipid subunit C-like domainDomain
C [auth c]IPR000245V-ATPase proteolipid subunitFamily
B [auth b]IPR046756V-type proton ATPase subunit S1/VOA1, transmembrane domainDomain
A [auth a]IPR026028ATPase, V0 complex, subunit 116kDa, eukaryoticFamily
A [auth a]IPR002490V-type ATPase, V0 complex, 116kDa subunit familyFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneAlpha-helical polytopicProton or Sodium translocating F-type, V-type and A-type ATPasesV-type and F-type ATPases

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALVacuolar ATPase (V-ATPase)V-ATPase, Vph1-VO isoform