6NXE | pdb_00006nxe

Cryo-EM Reconstruction of Protease-Activateable Adeno-Associated Virus 9 (AAV9-L001)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CB [auth 3]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
GB [auth 7]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
ZA [auth z]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
YA [auth y]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
XA [auth x]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
WA [auth w]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
USCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
HB [auth 8]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
FB [auth 6]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
EB [auth 5]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
EA [auth e]SCOP2 FamilyParvovirinae-like VP 8093947 4003479 SCOP2 (2022-06-29)
EA [auth e]SCOP2 SuperfamilyssDNA viruses 8093948 3000931 SCOP2 (2022-06-29)
ESCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
DB [auth 4]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
BB [auth 2]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
AB [auth 1]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyssDNA viruses 8093948 3000931 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CB [auth 3]e6nxe31 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
GB [auth 7]e6nxe71 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
ZA [auth z]e6nxez1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ze6nxeZ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
YA [auth y]e6nxey1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ye6nxeY1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
XA [auth x]e6nxex1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Xe6nxeX1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
WA [auth w]e6nxew1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
We6nxeW1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
VA [auth v]e6nxev1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ve6nxeV1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
UA [auth u]e6nxeu1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ue6nxeU1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
TA [auth t]e6nxet1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Te6nxeT1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
SA [auth s]e6nxes1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Se6nxeS1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
RA [auth r]e6nxer1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Re6nxeR1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
QA [auth q]e6nxeq1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Qe6nxeQ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
PA [auth p]e6nxep1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Pe6nxeP1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
OA [auth o]e6nxeo1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Oe6nxeO1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
NA [auth n]e6nxen1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ne6nxeN1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
MA [auth m]e6nxem1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Me6nxeM1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
LA [auth l]e6nxel1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Le6nxeL1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
KA [auth k]e6nxek1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ke6nxeK1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
JA [auth j]e6nxej1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Je6nxeJ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
IA [auth i]e6nxei1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ie6nxeI1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
HB [auth 8]e6nxe81 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
HA [auth h]e6nxeh1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
He6nxeH1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
GA [auth g]e6nxeg1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ge6nxeG1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
FB [auth 6]e6nxe61 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
FA [auth f]e6nxef1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Fe6nxeF1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
EB [auth 5]e6nxe51 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
EA [auth e]e6nxee1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ee6nxeE1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
DB [auth 4]e6nxe41 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
DA [auth d]e6nxed1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
De6nxeD1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
CA [auth c]e6nxec1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ce6nxeC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
BB [auth 2]e6nxe21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
BA [auth b]e6nxeb1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Be6nxeB1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
AB [auth 1]e6nxe11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
AA [auth a]e6nxea1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)
Ae6nxeA1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: 7tm_1F:ECOD (20:10:01)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013607Phospholipase A2-like domainDomain
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
IPR001403Coat protein VP1/VP2, ParvovirusDomain
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily