Annotations: 6NE0

Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I [auth L]	SCOP2B Superfamily	CRISPR-associated proteins	8052171	3001554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth L]	Cytochrom_B562	e6ne0L1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Cytochrom_B562	ECOD (v295.2)
H	Mannosidase_ig	e6ne0H1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Mannosidase_ig	ECOD (v295.2)
G	Mannosidase_ig	e6ne0G1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Mannosidase_ig	ECOD (v295.2)
F	Cytochrom_B562	e6ne0F1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Cytochrom_B562	ECOD (v295.2)
E	Mannosidase_ig	e6ne0E1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Mannosidase_ig	ECOD (v295.2)
D	Mannosidase_ig	e6ne0D1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Mannosidase_ig	ECOD (v295.2)
C	Cytochrom_B562	e6ne0C1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Cytochrom_B562	ECOD (v295.2)
B	Cytochrom_B562	e6ne0B1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Cytochrom_B562	ECOD (v295.2)
A	Cytochrom_B562	e6ne0A1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Cytochrom_B562	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
L [auth O]	Non-complementary R-loop DNA strand	-	-	-
K [auth N]	CRISPR target DNA (44-MER)	-	-	-
J [auth M]	CRISPR RNA (60-MER)	-	-	-
I [auth L]	CRISPR-associated endonuclease Cas6/Csy4	hydrolase activity catalytic activity endonuclease activity nuclease activity catalytic activity, acting on a nucleic acid RNA binding binding nucleic acid binding	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus maintenance of CRISPR repeat elements chromosome organization primary metabolic process DNA metabolic process biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus maintenance of CRISPR repeat elements chromosome organization primary metabolic process DNA metabolic process maintenance of DNA repeat elements nucleic acid metabolic process cellular component organization nucleobase-containing compound metabolic process organelle organization cellular process metabolic process cellular component organization or biogenesis macromolecule metabolic process	-
C, D, E, F, G C, D, E, F, G, H	CRISPR-associated protein Csy3	-	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-
B	CRISPR-associated protein Csy2	-	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-
A	CRISPR-associated protein Csy1	-	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth L]	IPR013396	CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	Family
I [auth L]	IPR042564	CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST superfamily	Homologous Superfamily
C, D, E, F, G C, D, E, F, G, H	IPR013399	Type I-F CRISPR-associated protein Csy3	Family
B	IPR013398	Type I-F CRISPR-associated protein Csy2	Family
A	IPR013397	Type I-F CRISPR-associated protein Csy1	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6NE0 | pdb_00006ne0

Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage