Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth H]SCOP2B SuperfamilyHydB/Nqo4-like8085741 3001849 SCOP2B (2022-06-29)
L [auth E]SCOP2B SuperfamilyNADH-quinone oxidoreductase subunit 11-like8060883 3002200 SCOP2B (2022-06-29)
N [auth F]SCOP2B SuperfamilyAntiporter subunits half-channel-like8093351 3002280 SCOP2B (2022-06-29)
N [auth F]SCOP2B SuperfamilyAntiporter subunits half-channel-like8059304 3002280 SCOP2B (2022-06-29)
O [auth D]SCOP2B SuperfamilyAntiporter subunits half-channel-like8093348 3002280 SCOP2B (2022-06-29)
O [auth D]SCOP2B SuperfamilyAntiporter subunits half-channel-like8059300 3002280 SCOP2B (2022-06-29)
I [auth S]SCOP2B SuperfamilyElectron transport accessory proteins8103000 3000325 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]PF00346e6nbqH1 A: alpha complex topologyX: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)T: alpha-helical domain in nickel-iron hydrogenase, large subunitF: PF00346ECOD (1.6)
A [auth H]PF00346e6nbqH3 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: PF00346ECOD (1.6)
K [auth C]PF00507e6nbqC1 A: extended segmentsX: NADH-quinone oxidoreductase subunit A (From Topology)H: NADH-quinone oxidoreductase subunit A (From Topology)T: NADH-quinone oxidoreductase subunit AF: PF00507ECOD (1.6)
L [auth E]PF00420e6nbqE1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: PF00420ECOD (1.6)
N [auth F]PF00361,PF00662,PF01010e6nbqF1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF00662,PF01010ECOD (1.6)
O [auth D]PF00361e6nbqD1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361ECOD (1.6)
P [auth B]PF00361,PF19530e6nbqB1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF19530ECOD (1.6)
Q [auth G]PF00499e6nbqG1 A: extended segmentsX: NADH-quinone oxidoreductase subunit J (From Topology)H: NADH-quinone oxidoreductase subunit J (From Topology)T: NADH-quinone oxidoreductase subunit JF: PF00499ECOD (1.6)
B [auth J]PF00329e6nbqJ1 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: PF00329ECOD (1.6)
D [auth I]PF00037e6nbqI1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
H [auth O]PF11910e6nbqO1 A: beta barrelsX: SH3H: SH3T: SH3F: PF11910ECOD (1.6)
I [auth S]PF11623e6nbqS1 A: beta barrelsX: SH3H: SH3T: SH3F: PF11623ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth H]1.10.645.10 Mainly Alpha Orthogonal Bundle Cytochrome-c3 Hydrogenase chain BCATH (utative)
L [auth E]1.10.287.3510 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
I [auth S]2.30.30.140 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth H]PF00346Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa)Respiratory-chain NADH dehydrogenase, 49 Kd subunit- Family
K [auth C]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
L [auth E]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
N [auth F]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
N [auth F]PF01010NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus (Proton_antipo_C)NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus- Family
N [auth F]PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus- Family
O [auth D]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
P [auth B]PF19530NAD(P)H-quinone oxidoreductase subunit 2 N-terminal (Ndh2_N)NAD(P)H-quinone oxidoreductase subunit 2 N-terminalThis domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the resp ...This domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the respiratory complex I from mitochondria and bacteria. It is involved in the electron transfer between photosynthetic complex I and photosystem I [1].
Domain
P [auth B]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
Q [auth G]PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
B [auth J]PF00329Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa)Respiratory-chain NADH dehydrogenase, 30 Kd subunit- Family
C [auth K]PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
D [auth I]PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
E [auth N]PF11909NADH-quinone oxidoreductase cyanobacterial subunit N (NdhN)NADH-quinone oxidoreductase cyanobacterial subunit N- Family
F [auth L]PF10716NADH dehydrogenase transmembrane subunit (NdhL)NADH dehydrogenase transmembrane subunit- Family
G [auth M]PF10664Cyanobacterial and plastid NDH-1 subunit M (NdhM)Cyanobacterial and plastid NDH-1 subunit M- Family
H [auth O]PF11910Cyanobacterial and plant NDH-1 subunit O (NdhO)Cyanobacterial and plant NDH-1 subunit O- Family
I [auth S]PF11623NAD(P)H dehydrogenase subunit S (NdhS)NAD(P)H dehydrogenase subunit S- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H]NAD(P)H-quinone oxidoreductase subunit H
J [auth A]NdhA---
K [auth C]NAD(P)H-quinone oxidoreductase subunit 3
L [auth E]NAD(P)H-quinone oxidoreductase subunit 4L
M [auth P]Proton-translocating NADH-quinone dehydrogenase subunit P NdhP- -
N [auth F]NADH dehydrogenase subunit 5
O [auth D]NAD(P)H-quinone oxidoreductase chain 4 1
P [auth B]NAD(P)H-quinone oxidoreductase subunit 2
Q [auth G]NADH-quinone oxidoreductase subunit J -
B [auth J]NAD(P)H-quinone oxidoreductase subunit J
C [auth K]NAD(P)H-quinone oxidoreductase subunit K
D [auth I]NAD(P)H-quinone oxidoreductase subunit I
E [auth N]NAD(P)H-quinone oxidoreductase subunit N -
F [auth L]NAD(P)H-quinone oxidoreductase subunit L -
G [auth M]NAD(P)H-quinone oxidoreductase subunit M -
H [auth O]NAD(P)H-quinone oxidoreductase subunit O -
I [auth S]Tlr0636 protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth H]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
A [auth H]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
A [auth H]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
A [auth H]IPR001135NADH-quinone oxidoreductase, subunit DDomain
K [auth C]IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidFamily
K [auth C]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
K [auth C]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
L [auth E]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
L [auth E]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
N [auth F]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
N [auth F]IPR002128NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminalDomain
N [auth F]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
N [auth F]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
N [auth F]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
O [auth D]IPR022997NADH-quinone oxidoreductase chain 4Family
O [auth D]IPR003918NADH:ubiquinone oxidoreductaseFamily
O [auth D]IPR010227NADH-quinone oxidoreductase, chain M/4Family
O [auth D]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
P [auth B]IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
P [auth B]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
P [auth B]IPR045693NAD(P)H-quinone oxidoreductase subunit 2, N-terminalDomain
Q [auth G]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
Q [auth G]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
B [auth J]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
B [auth J]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
B [auth J]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
B [auth J]IPR010218NADH dehydrogenase, subunit CFamily
C [auth K]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
C [auth K]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
D [auth I]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
D [auth I]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
D [auth I]IPR004497NAD(P)H-quinone oxidoreductase subunit IFamily
D [auth I]IPR010226NADH-quinone oxidoreductase, chain IFamily
E [auth N]IPR020874NAD(P)H-quinone oxidoreductase, subunit NFamily
F [auth L]IPR019654NAD(P)H-quinone oxidoreductase subunit LFamily
G [auth M]IPR018922NAD(P)H-quinone oxidoreductase subunit MFamily
H [auth O]IPR020905NAD(P)H-quinone oxidoreductase subunit OFamily
I [auth S]IPR021659NADH dehydrogenase-like complex, subunit SFamily