6NB1
Crystal structure of Escherichia coli ClpP protease complexed with small molecule activator, ACP1-06
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | ClpP/crotonase | 8034397 | 3000033 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CLP_protease | e6nb1A1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
B | CLP_protease | e6nb1B1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
C | CLP_protease | e6nb1C1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
D | CLP_protease | e6nb1D1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
E | CLP_protease | e6nb1E1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
F | CLP_protease | e6nb1F1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
G | CLP_protease | e6nb1G1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
H | CLP_protease | e6nb1H1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
I | CLP_protease | e6nb1I1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
J | CLP_protease | e6nb1J1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
K | CLP_protease | e6nb1K1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
L | CLP_protease | e6nb1L1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
M | CLP_protease | e6nb1M1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
N | CLP_protease | e6nb1N1 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: CLP_protease | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00574 | Clp protease (CLP_protease) | Clp protease | The Clp protease has an active site catalytic triad. In E. coli Clp protease, ser-111, his-136 and asp-185 form the catalytic triad. Swiss:P48254 has lost all of these active site residues and is therefore inactive. Swiss:P42379 contains two large in ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
IPR001907 | ATP-dependent Clp protease proteolytic subunit | Family | |
IPR018215 | ClpP, Ser active site | Active Site | |
IPR023562 | Clp protease proteolytic subunit /Translocation-enhancing protein TepA | Family | |
IPR033135 | ClpP, histidine active site | Active Site |