6NAL | pdb_00006nal

Crystal Structure of Gram Negative Toxin

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd6nalb2 All beta proteins Perfringolysin C-terminal-like Perfringolysin C-terminal-like Perfringolysin C-terminal-like Desulfobulbus propionicus cytolysin C-terminal domain (Desulfobulbus propionicus DSM 2032 ) [TaxId: 577650 ], SCOPe (2.08)
Bd6nalb1 Membrane and cell surface proteins and peptides Perfringolysin N-terminal-like Perfringolysin N-terminal-like Perfringolysin N-terminal-like Desulfobulbus propionicus cytolysin N-terminal domain (Desulfobulbus propionicus DSM 2032 ) [TaxId: 577650 ], SCOPe (2.08)
Ad6nala2 All beta proteins Perfringolysin C-terminal-like Perfringolysin C-terminal-like Perfringolysin C-terminal-like Desulfobulbus propionicus cytolysin C-terminal domain (Desulfobulbus propionicus DSM 2032 ) [TaxId: 577650 ], SCOPe (2.08)
Ad6nala1 Membrane and cell surface proteins and peptides Perfringolysin N-terminal-like Perfringolysin N-terminal-like Perfringolysin N-terminal-like Desulfobulbus propionicus cytolysin N-terminal domain (Desulfobulbus propionicus DSM 2032 ) [TaxId: 577650 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BThiol_cytolys_Ce6nalB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Perfringolysin O beta sandwich domain (From Topology)T: Perfringolysin O beta sandwich domainF: Thiol_cytolys_CECOD (1.6)
BThiol_cytolysine6nalB1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: Thiol_cytolysinECOD (1.6)
AThiol_cytolys_Ce6nalA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Perfringolysin O beta sandwich domain (From Topology)T: Perfringolysin O beta sandwich domainF: Thiol_cytolys_CECOD (1.6)
AThiol_cytolysine6nalA2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: Thiol_cytolysinECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.90.840.10 Alpha Beta Alpha-Beta Complex HIV-1 Reverse Transcriptase Chain A, domain 3CATH (utative)
B2.60.40.1430 Mainly Beta Sandwich Immunoglobulin-like Perfringolysin, domain 4CATH (utative)
A3.90.840.10 Alpha Beta Alpha-Beta Complex HIV-1 Reverse Transcriptase Chain A, domain 3CATH (utative)
A2.60.40.1430 Mainly Beta Sandwich Immunoglobulin-like Perfringolysin, domain 4CATH (utative)