6N1M | pdb_00006n1m

Crystal structure of Fumarate hydratase class II from Legionella pneumophila Philadelphia 1


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyL-aspartase/fumarase 8072356 4001433 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyL-aspartase-like 8072357 3001572 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATranspeptidasee6n1mA1 A: alpha bundlesX: PriB N-terminal domain-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: TranspeptidaseECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.275.10 Mainly Alpha Orthogonal Bundle Fumarase C Chain B, domain 1CATH (4.3.0)
A1.20.200.10 Mainly Alpha Up-down Bundle Fumarase C Chain A, domain 2CATH (4.3.0)
A1.10.40.30 Mainly Alpha Orthogonal Bundle Ribonucleotide Reductase Protein R1 domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00206Lyase (Lyase_1)LyaseDomain
PF10415Fumarase C C-terminus (FumaraseC_C)Fumarase C C-terminusFumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Kreb's cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The ...Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Kreb's cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit [1]. FumaraseC_C does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle.
Domain