6N0G | pdb_00006n0g

Cryo-EM structure of the HO BMC shell: subregion classified for BMC-T: TS-TDTDTD


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Z [auth JE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
Y [auth JD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
X [auth JC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
W [auth JB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
V [auth JA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
U [auth IF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
T [auth IE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
S [auth ID]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
R [auth IC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
Q [auth IB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
P [auth IA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
O [auth HF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
N [auth HE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
MA [auth LF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
M [auth HD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
LA [auth LE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
L [auth HC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
KA [auth LD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
K [auth HB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
JA [auth LC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
J [auth HA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
IA [auth LB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
I [auth GF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
HA [auth LA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
H [auth GE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
GA [auth KF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
G [auth GD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
FA [auth KE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
F [auth GC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
EA [auth KD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
E [auth GB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
DA [auth KC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
D [auth GA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
CA [auth KB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
BA [auth KA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
AA [auth JF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CTfb4e6n0gC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
BTfb4e6n0gB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
ATfb4e6n0gA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
Z [auth JE]Tfb4e6n0gJE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
Y [auth JD]Tfb4e6n0gJD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
X [auth JC]Tfb4e6n0gJC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
W [auth JB]Tfb4e6n0gJB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
V [auth JA]Tfb4e6n0gJA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
U [auth IF]Tfb4e6n0gIF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
T [auth IE]Tfb4e6n0gIE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
S [auth ID]Tfb4e6n0gID1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
R [auth IC]Tfb4e6n0gIC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
Q [auth IB]Tfb4e6n0gIB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
P [auth IA]Tfb4e6n0gIA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
O [auth HF]Tfb4e6n0gHF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
N [auth HE]Tfb4e6n0gHE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
MA [auth LF]Tfb4e6n0gLF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
M [auth HD]Tfb4e6n0gHD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
LA [auth LE]Tfb4e6n0gLE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
L [auth HC]Tfb4e6n0gHC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
KA [auth LD]Tfb4e6n0gLD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
K [auth HB]Tfb4e6n0gHB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
JA [auth LC]Tfb4e6n0gLC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
J [auth HA]Tfb4e6n0gHA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
IA [auth LB]Tfb4e6n0gLB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
I [auth GF]Tfb4e6n0gGF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
HA [auth LA]Tfb4e6n0gLA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
H [auth GE]Tfb4e6n0gGE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
GA [auth KF]Tfb4e6n0gKF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
G [auth GD]Tfb4e6n0gGD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
FA [auth KE]Tfb4e6n0gKE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
F [auth GC]Tfb4e6n0gGC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
EA [auth KD]Tfb4e6n0gKD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
E [auth GB]Tfb4e6n0gGB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
DA [auth KC]Tfb4e6n0gKC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
D [auth GA]Tfb4e6n0gGA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
CA [auth KB]Tfb4e6n0gKB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
BA [auth KA]Tfb4e6n0gKA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
AA [auth JF]Tfb4e6n0gJF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
ZA [auth S]Tfb4e6n0gS1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
YA [auth R]Tfb4e6n0gR1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
XA [auth Q]Tfb4e6n0gQ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
WA [auth P]Tfb4e6n0gP1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
VA [auth O]Tfb4e6n0gO1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
UA [auth N]Tfb4e6n0gN1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
TA [auth M]Tfb4e6n0gM1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
SA [auth L]Tfb4e6n0gL1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
RA [auth K]Tfb4e6n0gK1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
QA [auth J]Tfb4e6n0gJ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
PA [auth I]Tfb4e6n0gI1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
OA [auth H]Tfb4e6n0gH1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
NA [auth G]Tfb4e6n0gG1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
EB [auth X]Tfb4e6n0gX1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
DB [auth W]Tfb4e6n0gW1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
CB [auth V]Tfb4e6n0gV1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
BB [auth U]Tfb4e6n0gU1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
AB [auth T]Tfb4e6n0gT1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR011238Bacterial microcompartment shell protein PduTFamily
A, B, C
IPR000249Bacterial microcompartment domainDomain
A, B, C
IPR050575Bacterial microcompartment shellFamily
A, B, C
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
A, B, C
IPR037233CcmK-like superfamilyHomologous Superfamily
IPR020808Bacterial microcompartments protein, conserved siteConserved Site
IPR000249Bacterial microcompartment domainDomain
IPR050575Bacterial microcompartment shellFamily
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily
IPR000249Bacterial microcompartment domainDomain
IPR044870Bacterial microcompartment (BMC) circularly permuted domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily