6N09 | pdb_00006n09

Cryo-EM structure of the HO BMC shell: subregion classified for BMC-T: TD-TDTDTD


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Z [auth JB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
Y [auth JA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
X [auth IF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
W [auth IE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
V [auth ID]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
U [auth IC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
T [auth IB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
S [auth IA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
R [auth HF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
Q [auth HE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
PA [auth LF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
P [auth HD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
OA [auth LE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
O [auth HC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
NA [auth LD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
N [auth HB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
MA [auth LC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
M [auth HA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
LA [auth LB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
L [auth GF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
KA [auth LA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
K [auth GE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
JA [auth KF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
J [auth GD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
IA [auth KE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
I [auth GC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
HA [auth KD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
H [auth GB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
GA [auth KC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
G [auth GA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
FA [auth KB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
EA [auth KA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
DA [auth JF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
CA [auth JE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
BA [auth JD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
AA [auth JC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth JB]Tfb4e6n09JB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
Y [auth JA]Tfb4e6n09JA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
X [auth IF]Tfb4e6n09IF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
W [auth IE]Tfb4e6n09IE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
V [auth ID]Tfb4e6n09ID1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
U [auth IC]Tfb4e6n09IC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
T [auth IB]Tfb4e6n09IB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
S [auth IA]Tfb4e6n09IA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
R [auth HF]Tfb4e6n09HF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
Q [auth HE]Tfb4e6n09HE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
PA [auth LF]Tfb4e6n09LF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
P [auth HD]Tfb4e6n09HD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
OA [auth LE]Tfb4e6n09LE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
O [auth HC]Tfb4e6n09HC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
NA [auth LD]Tfb4e6n09LD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
N [auth HB]Tfb4e6n09HB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
MA [auth LC]Tfb4e6n09LC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
M [auth HA]Tfb4e6n09HA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
LA [auth LB]Tfb4e6n09LB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
L [auth GF]Tfb4e6n09GF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
KA [auth LA]Tfb4e6n09LA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
K [auth GE]Tfb4e6n09GE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
JA [auth KF]Tfb4e6n09KF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
J [auth GD]Tfb4e6n09GD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
IA [auth KE]Tfb4e6n09KE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
I [auth GC]Tfb4e6n09GC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
HA [auth KD]Tfb4e6n09KD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
H [auth GB]Tfb4e6n09GB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
GA [auth KC]Tfb4e6n09KC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
G [auth GA]Tfb4e6n09GA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
FA [auth KB]Tfb4e6n09KB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
EA [auth KA]Tfb4e6n09KA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
DA [auth JF]Tfb4e6n09JF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
CA [auth JE]Tfb4e6n09JE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
BA [auth JD]Tfb4e6n09JD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
AA [auth JC]Tfb4e6n09JC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
ZA [auth P]Tfb4e6n09P1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
YA [auth O]Tfb4e6n09O1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
XA [auth N]Tfb4e6n09N1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
WA [auth M]Tfb4e6n09M1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
VA [auth L]Tfb4e6n09L1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
UA [auth K]Tfb4e6n09K1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
TA [auth J]Tfb4e6n09J1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
SA [auth I]Tfb4e6n09I1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
RA [auth H]Tfb4e6n09H1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
QA [auth G]Tfb4e6n09G1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
HB [auth X]Tfb4e6n09X1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
GB [auth W]Tfb4e6n09W1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
FB [auth V]Tfb4e6n09V1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
FTfb4e6n09F1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
EB [auth U]Tfb4e6n09U1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
ETfb4e6n09E1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
DB [auth T]Tfb4e6n09T1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
DTfb4e6n09D1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
CB [auth S]Tfb4e6n09S1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
CTfb4e6n09C1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
BB [auth R]Tfb4e6n09R1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
BTfb4e6n09B1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
AB [auth Q]Tfb4e6n09Q1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)
ATfb4e6n09A1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR020808Bacterial microcompartments protein, conserved siteConserved Site
IPR000249Bacterial microcompartment domainDomain
IPR050575Bacterial microcompartment shellFamily
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily
IPR000249Bacterial microcompartment domainDomain
IPR044870Bacterial microcompartment (BMC) circularly permuted domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily