6MKE | pdb_00006mke

Crystal Structure of Peptidylprolyl Isomerase from Naegleria fowleri with bound FK506

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6mkea_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)
B	d6mkeb_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)
C	d6mkec_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)
D	d6mked_	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	automated matches	automated matches	Brain eating amoeba (Naegleria fowleri ) [TaxId: 5763 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	FKBP immunophilin/proline isomerase	8065249	4001062	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Rotamase-like	8065250	3000622	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Rotamase-like	8065250	3000622	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Rotamase-like	8065250	3000622	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Rotamase-like	8065250	3000622	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PIN	e6mkeA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: ADP-ribosylation	T: ADP-ribosylation	F: PIN	ECOD (v294.1)
B	Anoctamin	e6mkeB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Anoctamin	ECOD (v294.1)
C	Anoctamin	e6mkeC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Anoctamin	ECOD (v294.1)
D	Anoctamin	e6mkeD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Anoctamin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)
B	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)
C	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)
D	3.10.50.40	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)	FKBP-type peptidyl-prolyl cis-trans isomerase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Peptidylprolyl isomerase	isomerase activity catalytic activity, acting on a protein peptidyl-prolyl cis-trans isomerase activity catalytic activity cis-trans isomerase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR046357	Peptidyl-prolyl cis-trans isomerase domain superfamily	Homologous Superfamily
A, B, C, D	IPR050689	FKBP-type Peptidyl-prolyl cis-trans Isomerase	Family
A, B, C, D	IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.