Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AJmjC_1e6mevA1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)
BJmjC_1e6mevB1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)
CJmjC_1e6mevC1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)
DJmjC_1e6mevD1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)
EJmjC_1e6mevE1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)
FJmjC_1e6mevF1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)
GJmjC_1e6mevG1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)
HJmjC_1e6mevH1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: JmjC_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
A1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)
B2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
B1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)
C2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
C1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)
D2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
D1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)
E2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
E1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)
F2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
F1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)
G2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
G1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)
H2.60.120.650 Mainly Beta Sandwich Jelly Rolls CupinCATH (utative)
H1.20.1280.270 Mainly Alpha Up-down Bundle Monooxygenase CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02373JmjC domain, hydroxylase (JmjC)JmjC domain, hydroxylaseThe JmjC domain belongs to the Cupin superfamily [3]. JmjC-domain proteins may be protein hydroxylases that catalyse a novel histone modification [4]. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the ...The JmjC domain belongs to the Cupin superfamily [3]. JmjC-domain proteins may be protein hydroxylases that catalyse a novel histone modification [4]. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalysing hydroxylation [5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR050910JMJD6 family arginine demethylases/lysyl-hydroxylasesFamily
A, B, C, D, E
IPR003347JmjC domainDomain